Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Knoxdaviesia_20proteae_20[genbank_20GCA_5F001510565.1_202016-01-11]
133 sequences; 35,489,142 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq53 217 5e-53
>seq53
Length=1555449
Score = 217 bits (240), Expect = 5e-53
Identities = 248/329 (75%), Gaps = 7/329 (2%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| ||||| || || || || || ||||| || || || |||||||| ||| |||||
Sbjct 560563 GGCACCACCGCCGCCACGGTGTCGCGCGTACGGGCGCTGTACGACTTTGTGCCGTCGGAG 560622
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
||||||||| ||| |||| ||||||||| || || || || || ||||| |||||||||
Sbjct 560623 CCCGGCGAGCTGGAGTTCCACAAAGGCGATATCATCGCCGTGCTGGAGTCGGTGTACAAG 560682
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||| || ||| || |||||||||| ||||| |||||||| ||||||
Sbjct 560683 GACTGGTGGCGCGGCCTGCTGAAGGGCAAGACCGGCATTTTCCCGCTCAACTACGTCGAG 560742
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
|||||| ||||| || ||| ||||| || | || ||| |||||||||| || ||
Sbjct 560743 AAGCTGTCCGATCCGACGCCGGACGAGCTGCAGCGCGAGGCTGAGATGGAGGCCGAGGTG 560802
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCA---CTAGTTCGAGT 668
||||| || ||||| ||||| ||||||||| | | |||||||||| | || ||| |
Sbjct 560803 TTTGCTGAAATCAAAAACGTCGAGAAGCTGTTGACGCTGCTGAGCACGTCGAGCTCG-GC 560861
Query 669 GCCGACGCTAGG--GACAATGAGGAGATC 695
|||| ||| ||| |||| || ||||||
Sbjct 560862 GCCG-CGCGAGGACGACAGCGACGAGATC 560889
Score = 80.6 bits (88), Expect = 8e-12
Identities = 70/87 (80%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 820 TCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAAC 879
|||||| |||||||| || |||||||| |||||||||||||| || | ||||||||| |
Sbjct 561096 TCCAGACGATTTCACCCAACTCAACGAAAAGTTCATCAAGGCCCGGAGAGACTACGAAGC 561155
Query 880 CCTCCTTGAAGCCTCGATGTCGCAACC 906
||| || ||| | || ||| | || ||
Sbjct 561156 CCTGCTCGAATCGTCCATGGCCCACCC 561182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945576804135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |