Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leptographium_20lundbergii_20[genbank_20GCA_5F001455505.1_202015-12-
02] 411 sequences; 26,537,341 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2 165 3e-37
>seq2
Length=564189
Score = 165 bits (182), Expect = 3e-37
Identities = 204/279 (73%), Gaps = 0/279 (0%)
Strand=Plus/Plus
Query 378 ACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGC 437
|| || || || || |||||||| || || || | |||||| | | || || |||| |
Sbjct 73340 ACCGCGGCGACGGTGTCCCGCGTCCGGGCACTCTTCGACTTTGCTGCGTCCGAGCCCGAC 73399
Query 438 GAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGG 497
||| | | ||| ||||||||| | || || || |||||||| || ||| |||||||
Sbjct 73400 GAGCTCGACTTCAAGAAAGGCGACGTCATCGCCGTGCTCGAGTCGGTTTACCGGGACTGG 73459
Query 498 TGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTG 557
||| || || || || | || ||||||||||| |||||||| ||||||| |||
Sbjct 73460 TGGCGTGGCTCGCTCAAGGGCCGTACGGGCATCTTCCCGCTCAACTACGTCGAGATCCTG 73519
Query 558 CAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCG 617
|| || | || ||||| || | || |||||||||||||| || ||||||||
Sbjct 73520 GCCGACCCGTCGCCCGATGAGCTGCAGCGCGAGGCTCAGATGGAGGCCGAGGTCTTTGCC 73579
Query 618 GAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656
|||||||||||||| ||||||||||| | || ||||||
Sbjct 73580 GAGATCAAGAACGTCGAGAAGCTGCTGACCCTCCTGAGC 73618
Score = 100 bits (110), Expect = 9e-18
Identities = 166/239 (69%), Gaps = 18/239 (8%)
Strand=Plus/Plus
Query 702 CTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCG 761
|||||||| ||||| || | |||||||||||| ||||| |||| || | ||||| |||
Sbjct 73719 CTGTACCATCAGACACTGGCCATACGGCCGAAGCTGATCAAGCTGATCGAGAAGTACTCG 73778
Query 762 CAAAAGAAGGGTAAGTGGAATCTTTTACG--------CGAAT----TTGTGTGTTGGCC- 808
|| || |||||| || | ||| | || | | | || | | |||
Sbjct 73779 CAGAAAAAGGGTGAGCGCGTTCTGTCACTGTTCCCGTCAGGTCCTCTGGTCTTTCGGCAT 73838
Query 809 ACTGATCGTGTTC-----CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCAC 863
||||| || || |||| || ||||| ||||||||||||||||| |||||||| |
Sbjct 73839 ACTGACAGTCCTCTCTGCCAGACGACTTCACCCAGCTCAACGAGAAGTTTATCAAGGCGC 73898
Query 864 GCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTAC 922
| ||||||||||| |||| || || | || ||| | || || |||||| | |||||
Sbjct 73899 GGCGCGACTACGAGGCCCTGCTGGAGTCTTCCATGGCCCACCCGCCGCAGCACAGCTAC 73957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945528319545
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |