Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leptoxyphium_20fumago_20[genbank_20GCA_5F001660795.1_202016-06-09] 511 sequences; 25,022,896 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq157 262 1e-66 >seq157 Length=265275 Score = 262 bits (290), Expect = 1e-66 Identities = 395/554 (71%), Gaps = 23/554 (4%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || ||||| || || || ||| ||| || || || | ||||||||||| || || || Sbjct 156338 GGCACCACTGCTGCGACGGTCAGCCGAGTGCGAGCGTTGTACGACTTCACACCTTCAGAG 156279 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || || ||| |||| ||| | || | |||| | |||||||| || || || || ||| Sbjct 156278 CCTGGTGAGCTGGCATTCAGGAAGGACGACGTCATTGCGGTGCTGGAAAGCGTCTATAAG 156219 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||||||||| ||| | |||||||| || |||||||| || ||||| || ||| Sbjct 156218 GACTGGTGGAAGGGTAGCCTGAGAGGACAGACTGGTATCTTCCCTCTGAACTACGTGGAG 156159 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAG-ATGGAGGCGGAAGT 610 ||||| |||||||| ||||| |||||||| || | || || ||| |||||||| ||||| Sbjct 156158 AAGCTACAGGATCCCACCAAAGAGGAGCTAGAACGTGATGC-CAGCATGGAGGCTGAAGT 156100 Query 611 CTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTA------GTTC 664 |||| ||||| ||| ||||| ||| | || || |||| ||| | || Sbjct 156099 ATTTGGCGAGATACGGAATGTGGAAAAGTTACTTGCGTTGCTAAGCGTGAGAGAGGGTGG 156040 Query 665 GAGT-GCCGA--CGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTC 721 |||| | || || ||||| | |||||||||| | ||||||||| ||| | Sbjct 156039 GAGTAGAAGAGGCGAAAGGGAGGAAGAGGAGATCAGTGAGCTGTACCAGCGGACTCTCAG 155980 Query 722 GATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAA 781 || | || |||||||||||||| ||||| ||||| ||||| ||||| ||| ||| | Sbjct 155979 CATCAGACCTAAGTTGATCGAGCTGATTGGGAAGTACTCGCAGAAGAAAGGTGAGTTAA- 155921 Query 782 TCTTTTACGCGAATTTGT-GTGTT-----GGC---CACTGATCGTGTTCCAGATGATTTC 832 | || | |||||| || || ||| ||||||| | ||||||| || Sbjct 155920 --TGAGACTGGGATTTGTGGTATTCGGACGGCGTTGACTGATCTCGCCACAGATGACTTT 155863 Query 833 ACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCC 892 || ||| | ||||||||||||||||| ||| | || ||||| || |||| ||||| | Sbjct 155862 ACACAGTTGAACGAGAAGTTCATCAAAGCAAGACGAGACTATGAGGCCCTGCTTGACTCT 155803 Query 893 TCGATGTCGCAACC 906 || ||||| ||||| Sbjct 155802 TCCATGTCCCAACC 155789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945510879045