Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307925.1_202015-10-
07] 5,380 sequences; 48,332,782 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2351 996 0.0
>seq2351
Length=66013
Score = 996 bits (1104), Expect = 0.0
Identities = 983/1269 (77%), Gaps = 37/1269 (3%)
Strand=Plus/Plus
Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61
|||| ||||||| |||||||| ||||| |||||||||||||| |||||||| ||| |
Sbjct 44078 GCAGGTCAAGGCCAAGATCCTTGAGCGCATGGGTGAATGGACCGAGATGTTTTCCAAGGA 44137
Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121
||| ||||| || ||||||||||||||||| |||||||| |||||||| ||| |||| |
Sbjct 44138 CCCAGATCTAGGTATCATGGAGCAGGCCTACATGAGGCTCAAGACACAGAGTACGTGGCA 44197
Query 122 TCAACTCTGGTTCGTTGGGAGCA---CTGAC-CAACGTGTTGTAGACCCTAACCTGCGAC 177
|| | ||| || |||||| | |||| | | | ||| |||||||||||| || |
Sbjct 44198 TCGTCCCTGATTTGTTGGGCGACTTCCTGATTCGATTTCTTGCAGACCCTAACCTTCGCC 44257
Query 178 CTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGG 237
|||||||||| || || |||||||||||||| || || |||||| |||||||||||||
Sbjct 44258 CTCCGTCGAAGCCGCAAAAGACCCAGATCACAGAGTCAGACCGCGCAAAGGAAGAGGAGG 44317
Query 238 AGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCCGCCGCCA 297
|| | |||||||| ||||| || ||| |||| || | ||| ||| | ||||| || ||||
Sbjct 44318 AGTTGCAGATGGCACTGGCTCTGTCCATCAAAGAGAACGGCACCCAACCATCTGCTGCCA 44377
Query 298 GGTCCAACCAGCCGCAAGCAAAAGCCCCACAA--CAATCCGCCCCGG-AACAAGAGCAGC 354
||||||||| || |||||||| | | ||| | ||||| | | || || |||| |
Sbjct 44378 AGTCCAACCAACCCCAAGCAAATTCGGCGCAAGCCGCTCCGCAACAGCAAGAACAGCAAC 44437
Query 355 ATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACG 414
| || || ||||| |||||||| || ||||| || || ||||| || || || || ||||
Sbjct 44438 ACCAGGCGATTGCTTCTGGAACTACCGCAGCCACTGTATCCCGTGTCCGTGCTCTCTACG 44497
Query 415 ACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTC 474
||||||| || || || |||||||| ||||| ||||||||||| || || || ||||| |
Sbjct 44498 ACTTCACTCCTTCCGAGCCCGGCGAATTGGCGTTCCGCAAAGGTGATATCATCGCGGTGC 44557
Query 475 TCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCC 534
| ||||| ||||||||||| ||||||||||||||| |||||||||||||||| || ||||
Sbjct 44558 TTGAGTCAGTGTACAAGGATTGGTGGAAGGGTTCTTTGCGTGGACAGACCGGAATTTTCC 44617
Query 535 CCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTC 594
| ||||||||||| ||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct 44618 CTCTCAACTATGTGGAGAAGCTGCAGGATCCGACCAAGGAGGAGCTCGAAAGGGAAGCTC 44677
Query 595 AGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGA 654
|||||||||| || |||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 44678 AGATGGAGGCCGAGGTCTTTGCAGAGATCAAGAATGTGGAGAAGCTGCTGGCTCTGCTGA 44737
Query 655 GCACTAGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGA 714
|||| ||||| || || || || ||||| || |||||||| |||||||||||||||||||
Sbjct 44738 GCACGAGTTCAAGCGCGGATGCGAGGGAAAACGAGGAGATTACTTCGCTGTACCACAAGA 44797
Query 715 CAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTA 774
| || |||||||||| ||| ||||||| |||||||| |||||||| || ||||| ||
Sbjct 44798 CGGTTGCGATACGGCCAAAGCTGATCGAACTCATTGGGAAGTATTCTCAGAAGAAAGGCG 44857
Query 775 AGTGGAATCTTTTACGCGAATTTGTGTGTTGGC-CA--CTGATCGTGTTCCAGATGATTT 831
||| | ||| || ||| | || | || |||| || | ||||||| ||
Sbjct 44858 AGTATACCTGTTTTGTTGA---CGTGGGGTGCCACAAGCTGACCGGCGTACAGATGACTT 44914
Query 832 CACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGC 891
||| ||| | |||||||||||||||||||| ||||| || |||||| ||||||| || ||
Sbjct 44915 CACTCAGTTGAACGAGAAGTTCATCAAGGCTCGCCGTGATTACGAAGCCCTCCTCGAGGC 44974
Query 892 CTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCGTCAACCCTATGGCTACGGCGCCGG 951
|| ||||| ||| | || || || | || || || || || ||||||||||| || |
Sbjct 44975 TTCCATGTCACAAGCTGCACAACCTGCATATGGCCGCCAGCCTTATGGCTACGGTGCAGC 45034
Query 952 CGCCCCGCCGCCTCAGAGTGCTCCGTACGGTGGCTAT----------------------- 988
||||| |||| || |||||||| ||||||||||||
Sbjct 45035 TGCCCCTCCGCAGCAAAGTGCTCCATACGGTGGCTATCCTCCGCAGGGTCCTCCGCAAGG 45094
Query 989 -CCTCCTCAAGGACCTCCTCAGGAACAGTTTTACTCGCCTACTCCAGCCGCAGACCAAGG 1047
||||||||||||||||| ||||| || ||||||||| || | |||||||||||
Sbjct 45095 ACCTCCTCAAGGACCTCCGCAGGACAGGTATTACTCGCCAGGCCCGGGGGCAGACCAAGG 45154
Query 1048 CTACGGATATCCTCCTCAGAATGGGCCTCAGCCCTTCACGATGGCTCAGCCCTCACAAGC 1107
|| || || || || |||||||| |||||||||||| ||||| || || ||||||
Sbjct 45155 TTATGGCTACCCGCCGCAGAATGGTGCTCAGCCCTTCATGATGGTTCCTCCAGGACAAGC 45214
Query 1108 ACCTCCTTCTGCACAGGTGGCTAGTCCTAGACCAGCGAATGGCGAGCTCTCCTACGTCCC 1167
|| || | |||||| | |||| || | || ||||| || || | ||||| || ||
Sbjct 45215 TCCCCCACCCGCACAGATCACTAGCCCGAAGCCCGCGAACGGTGATCCGTCCTATGTACC 45274
Query 1168 GCAGCGCGTGCCTGTCGGTGGAAGGCCCACATCCATGGCCTTTCCCCAGGAAATGGCGGC 1227
||||||||| || ||||||||| | ||| ||| ||||| || || || |||||||| ||
Sbjct 45275 GCAGCGCGTCCCGGTCGGTGGACGACCCCAATCGATGGCTTTCCCGCAAGAAATGGCAGC 45334
Query 1228 CAACAGCCC 1236
|||||| ||
Sbjct 45335 CAACAGTCC 45343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944661701100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |