Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Macrophomina_20phaseolina_20[genbank_20GCA_5F001307945.1_202015-10-
07] 4,510 sequences; 46,345,754 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq795 996 0.0
>seq795
Length=67501
Score = 996 bits (1104), Expect = 0.0
Identities = 983/1269 (77%), Gaps = 37/1269 (3%)
Strand=Plus/Minus
Query 2 GCAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAA 61
|||| ||||||| |||||||| ||||| |||||||||||||| |||||||| ||| |
Sbjct 23412 GCAGGTCAAGGCCAAGATCCTTGAGCGCATGGGTGAATGGACCGAGATGTTTTCCAAGGA 23353
Query 62 CCCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGA 121
||| ||||| || ||||||||||||||||| |||||||| |||||||| ||| |||| |
Sbjct 23352 CCCAGATCTAGGTATCATGGAGCAGGCCTACATGAGGCTCAAGACACAGAGTACGTGGCA 23293
Query 122 TCAACTCTGGTTCGTTGGGAGCA---CTGAC-CAACGTGTTGTAGACCCTAACCTGCGAC 177
|| | ||| || |||||| | |||| | | | ||| |||||||||||| || |
Sbjct 23292 TCGTCCCTGATTTGTTGGGCGACTTCCTGATTCGATTTCTTGCAGACCCTAACCTTCGCC 23233
Query 178 CTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGG 237
|||||||||| || || |||||||||||||| || || |||||| |||||||||||||
Sbjct 23232 CTCCGTCGAAGCCGCAAAAGACCCAGATCACAGAGTCAGACCGCGCAAAGGAAGAGGAGG 23173
Query 238 AGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACCGAGCCATCCGCCGCCA 297
|| | |||||||| ||||| || ||| |||| || | ||| ||| | ||||| || ||||
Sbjct 23172 AGTTGCAGATGGCACTGGCTCTGTCCATCAAAGAGAACGGCACCCAACCATCTGCTGCCA 23113
Query 298 GGTCCAACCAGCCGCAAGCAAAAGCCCCACAA--CAATCCGCCCCGG-AACAAGAGCAGC 354
||||||||| || |||||||| | | ||| | ||||| | | || || |||| |
Sbjct 23112 AGTCCAACCAACCCCAAGCAAATTCGGCGCAAGCCGCTCCGCAACAGCAAGAACAGCAAC 23053
Query 355 ATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACG 414
| || || ||||| |||||||| || ||||| || || ||||| || || || || ||||
Sbjct 23052 ACCAGGCGATTGCTTCTGGAACTACCGCAGCCACTGTATCCCGTGTCCGTGCTCTCTACG 22993
Query 415 ACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTC 474
||||||| || || || |||||||| ||||| ||||||||||| || || || ||||| |
Sbjct 22992 ACTTCACTCCTTCCGAGCCCGGCGAATTGGCGTTCCGCAAAGGTGATATCATCGCGGTGC 22933
Query 475 TCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCC 534
| ||||| ||||||||||| ||||||||||||||| |||||||||||||||| || ||||
Sbjct 22932 TTGAGTCAGTGTACAAGGATTGGTGGAAGGGTTCTTTGCGTGGACAGACCGGAATTTTCC 22873
Query 535 CCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTC 594
| ||||||||||| ||||||||||||||||| ||||||||||||||||| || |||||||
Sbjct 22872 CTCTCAACTATGTGGAGAAGCTGCAGGATCCGACCAAGGAGGAGCTCGAAAGGGAAGCTC 22813
Query 595 AGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGA 654
|||||||||| || |||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 22812 AGATGGAGGCCGAGGTCTTTGCAGAGATCAAGAATGTGGAGAAGCTGCTGGCTCTGCTGA 22753
Query 655 GCACTAGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGA 714
|||| ||||| || || || || ||||| || |||||||| |||||||||||||||||||
Sbjct 22752 GCACGAGTTCAAGCGCGGATGCGAGGGAAAACGAGGAGATTACTTCGCTGTACCACAAGA 22693
Query 715 CAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTA 774
| || |||||||||| ||| ||||||| |||||||| |||||||| || ||||| ||
Sbjct 22692 CGGTTGCGATACGGCCAAAGCTGATCGAACTCATTGGGAAGTATTCTCAGAAGAAAGGCG 22633
Query 775 AGTGGAATCTTTTACGCGAATTTGTGTGTTGGC-CA--CTGATCGTGTTCCAGATGATTT 831
||| | ||| || ||| | || | || |||| || | |||| || ||
Sbjct 22632 AGTATACCTGTTTTGTTGA---CGTGGGGTGCCACAAGCTGACCGGCGTACAGACGACTT 22576
Query 832 CACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGC 891
||| ||| | |||||||||||||||||||| ||||| || |||||| ||||||| || ||
Sbjct 22575 CACTCAGTTGAACGAGAAGTTCATCAAGGCTCGCCGTGATTACGAAGCCCTCCTCGAGGC 22516
Query 892 CTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCGTCAACCCTATGGCTACGGCGCCGG 951
|| ||||| ||| | || || || | || || || || || ||||||||||| || |
Sbjct 22515 TTCCATGTCACAAGCTGCACAACCTGCATATGGCCGCCAGCCTTATGGCTACGGTGCAGC 22456
Query 952 CGCCCCGCCGCCTCAGAGTGCTCCGTACGGTGGCTAT----------------------- 988
||||| |||| || |||||||| ||||||||||||
Sbjct 22455 TGCCCCTCCGCAGCAAAGTGCTCCATACGGTGGCTATCCTCCGCAGGGTCCTCCGCAAGG 22396
Query 989 -CCTCCTCAAGGACCTCCTCAGGAACAGTTTTACTCGCCTACTCCAGCCGCAGACCAAGG 1047
||||||||||||||||| ||||| || ||||||||| || | |||||||||||
Sbjct 22395 ACCTCCTCAAGGACCTCCGCAGGACAGGTATTACTCGCCAGGCCCGGGGGCAGACCAAGG 22336
Query 1048 CTACGGATATCCTCCTCAGAATGGGCCTCAGCCCTTCACGATGGCTCAGCCCTCACAAGC 1107
|| || || || || |||||||| |||||||||||| ||||| || || ||||||
Sbjct 22335 TTATGGCTACCCGCCGCAGAATGGTGCTCAGCCCTTCATGATGGTTCCTCCAGGACAAGC 22276
Query 1108 ACCTCCTTCTGCACAGGTGGCTAGTCCTAGACCAGCGAATGGCGAGCTCTCCTACGTCCC 1167
|| || | |||||| | |||| || | || ||||| ||||| | ||||| || ||
Sbjct 22275 TCCCCCACCCGCACAGATCACTAGCCCGAAGCCCGCGAACGGCGATCCGTCCTATGTACC 22216
Query 1168 GCAGCGCGTGCCTGTCGGTGGAAGGCCCACATCCATGGCCTTTCCCCAGGAAATGGCGGC 1227
||||||||| || ||||||||| | ||| ||| ||||| || || || |||||||| ||
Sbjct 22215 GCAGCGCGTCCCGGTCGGTGGACGACCCCAATCGATGGCTTTCCCGCAAGAAATGGCAGC 22156
Query 1228 CAACAGCCC 1236
|||||| ||
Sbjct 22155 CAACAGTCC 22147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944813433450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |