Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734215.1_202014-07-28] 5,947 sequences; 37,593,290 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1740 167 7e-38 >seq1740 Length=60733 Score = 167 bits (184), Expect = 7e-38 Identities = 209/287 (73%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || ||||| || || ||||| || | || || || || |||||||| || || || Sbjct 39248 GGGACCACGGCGGCGACCGTATCAAGGGTGCGGGCGCTGTACGACTTTGTACCATCCGAG 39189 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||||| | | ||| || |||||| | || || || |||||||||||||||||| Sbjct 39188 GACGGCGAGCTAGAGTTCAAAAAGGGCGACGTCATCGCAGTCCTCGAGTCTGTGTACAAG 39129 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| ||||| ||| || |||| || ||||||||||| || || |||||| Sbjct 39128 GACTGGTGGCGCGGTTCGCTGAAGGGCAAGACGGGTATCTTCCCCCTTAATTACGTCGAG 39069 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||| || || || || || | || | || || || |||||||| || || Sbjct 39068 AAGCTGGCAGACCCGACGCCAGACGAATTGCAGCGCGAGGCGCAAATGGAGGCCGAGGTA 39009 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||| | |||||||||||||| ||||||||| | | || |||||||| Sbjct 39008 TTTTCCGAGATCAAGAACGTCGAGAAGCTGTTGACGCTCCTGAGCAC 38962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944562813465