Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001936435.1_202017-01-05] 7,631 sequences; 38,751,292 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq7628 167 7e-38 >seq7628 Length=79597 Score = 167 bits (184), Expect = 7e-38 Identities = 209/287 (73%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || ||||| || || ||||| || | || || || || |||||||| || || || Sbjct 21488 GGGACCACGGCGGCGACCGTATCAAGGGTGCGGGCGCTGTACGACTTTGTACCATCCGAG 21547 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 ||||||| | | ||| || |||||| | || || || |||||||||||||||||| Sbjct 21548 GACGGCGAGCTAGAGTTCAAAAAGGGCGACGTCATCGCAGTCCTCGAGTCTGTGTACAAG 21607 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| ||||| ||| || |||| || ||||||||||| || || |||||| Sbjct 21608 GACTGGTGGCGCGGTTCGCTGAAGGGCAAGACGGGTATCTTCCCCCTTAATTACGTCGAG 21667 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||| || || || || || | || | || || || |||||||| || || Sbjct 21668 AAGCTGGCAGACCCGACGCCAGACGAATTGCAGCGCGAGGCGCAAATGGAGGCCGAGGTA 21727 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 ||| | |||||||||||||| ||||||||| | | || |||||||| Sbjct 21728 TTTTCCGAGATCAAGAACGTCGAGAAGCTGTTGACGCTCCTGAGCAC 21774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944269115445