Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Memnoniella_20echinata_20[genbank_20GCA_5F001599555.1_202016-03-01] 106 sequences; 43,681,955 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3 194 5e-46 >seq3 Length=5051094 Score = 194 bits (214), Expect = 5e-46 Identities = 214/285 (75%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || ||||| || || ||||| ||||| ||||| || ||||||||||| | | || Sbjct 3757825 GGCACCACCGCTGCCACCGTGAGTCGCGTGCGCGCGCTCTACGACTTCACATCTACCGAG 3757884 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 | | ||||||| ||| || || ||| | ||||| || || ||| ||||||||| Sbjct 3757885 GCGGAGGAGTTGGAGTTCAAGAAGGGAGACGTGATTGCCGTGCTAGAGAGCGTGTACAAG 3757944 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 ||||||||| || ||||| || |||| ||||||||||| |||||||| || ||| Sbjct 3757945 GACTGGTGGCGAGGGTCTCTCAAGGGCAAGACGGGCATCTTCCCTCTCAACTACGTGGAG 3758004 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 ||| || |||||| ||| || ||||| || | || || ||||||||||| || || Sbjct 3758005 AAGTTGACGGATCCGACCCCCGACGAGCTGCAGCGCGAGGCACAGATGGAGGCCGAGGTG 3758064 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 |||||||||||||||||||||||||||||||| | || |||||| Sbjct 3758065 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTGACGCTCCTGAGC 3758109 Score = 84.2 bits (92), Expect = 7e-13 Identities = 147/209 (70%), Gaps = 10/209 (5%) Strand=Plus/Plus Query 723 ATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTG-GAA 781 || || || ||| ||||| |||| |||| || ||||| || ||||||||| || ||| Sbjct 3758238 ATTCGACCCAAGCTGATCAAGCTGATTGAGAAATATTCACAGAAGAAGGGTGCGTTTGAA 3758297 Query 782 TC---TTTTACGC--GAATTTG---TGTGTTGGCCACTGATCGTGTTCCAGATGATTTCA 833 | | |||| | || | ||| ||| | | || ||| | ||||||| |||| Sbjct 3758298 CCAGCTGCTACGGATGGATGAGACCTGTTTTGACTAACGA-CGTCGTGCAGATGACTTCA 3758356 Query 834 CGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCT 893 | ||||| |||||||||||||||||||| | || |||||||| | || | ||| | | Sbjct 3758357 CACAGCTGAACGAGAAGTTCATCAAGGCCAGACGAGACTACGAGGCTCTGTTGGAATCGT 3758416 Query 894 CGATGTCGCAACCAGCGCAGCCCGGCTAC 922 | |||||||| || | |||| ||||| Sbjct 3758417 CCATGTCGCACCCGCCTCAGCATAGCTAC 3758445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945581513070