Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09- 23] 491 sequences; 33,245,410 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq205 208 2e-50 >seq205 Length=19826 Score = 208 bits (230), Expect = 2e-50 Identities = 356/514 (69%), Gaps = 27/514 (5%) Strand=Plus/Plus Query 411 TACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCG 470 |||||||| || || || || |||||||| | |||||| || ||| || ||||| Sbjct 8263 TACGACTTTACCCCATCCGAGGCCGGCGAGCTTGCTTTCAAGAAGAACGATATCATTGCT 8322 Query 471 GTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATC 530 || | ||||| || ||||| || |||||||| || || | ||||||||||||||| Sbjct 8323 GTGTTGGAGTCCGTTTACAAAGATTGGTGGAAAGGCAGCTTGAGAGGACAGACCGGCATC 8382 Query 531 TTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAA 590 || || | ||||||||||| || | |||||||| |||||||| ||| | ||||| || Sbjct 8383 TTTCCATTGAACTATGTCGAAAAAATACAGGATCCGACCAAGGAAGAGTTGGAGAGGGAT 8442 Query 591 GCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTG 650 || ||||||||| | || || || | ||||||||||| || |||||||||||||| || Sbjct 8443 GCACAGATGGAGTCCGAGGTGTTCGGCGAGATCAAGAATGTTGAGAAGCTGCTAGCACTA 8502 Query 651 CT--------GAGCACTAGTTCGAG--TGCCGACGCTA--GGGACAATGAGGAGATCACT 698 || ||||| || | | | ||| || | |||| | || || ||| Sbjct 8503 CTCAGTGTGGGAGCAGAAGGAGGTGGCAGGCGAGGCGAGCGGGAAGAGGAAGAAGTCAGC 8562 Query 699 TCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTAT 758 || ||||| |||| || ||||| |||||||| ||||||||||| | | ||| Sbjct 8563 GAACTTTACCAGCGGACACTGAGTATACGACCGAAGTTAATCGAGCTCATCGCCCGGTAC 8622 Query 759 TCGCAAAAGAAGGGTAAGTGGAATC--TTTTACGCGAATTTG----TGTGTTGGCCACTG 812 ||||| || | ||| ||| || | | | || || | || |||| Sbjct 8623 TCGCAGAAAA-----AAGGGGAGTCCGTGATGCTCGGCTTGGAAGATGGTATGGC----T 8673 Query 813 ATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACT 872 | | | |||| |||||||| || || ||||||||||||||||| ||||| ||||||| Sbjct 8674 AACACGCAACAGACGATTTCACTCAACTGAACGAGAAGTTCATCAAAGCACGGCGCGACT 8733 Query 873 ACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906 | ||| | | || || |||| ||||| ||||| Sbjct 8734 ATGAAGCTTTGCTCGAGTCCTCCATGTCTCAACC 8767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945514367145