Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20arachidis_20[genbank_20GCA_5F001297265.1_202015-09-
23] 491 sequences; 33,245,410 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq205 208 2e-50
>seq205
Length=19826
Score = 208 bits (230), Expect = 2e-50
Identities = 356/514 (69%), Gaps = 27/514 (5%)
Strand=Plus/Plus
Query 411 TACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCG 470
|||||||| || || || || |||||||| | |||||| || ||| || |||||
Sbjct 8263 TACGACTTTACCCCATCCGAGGCCGGCGAGCTTGCTTTCAAGAAGAACGATATCATTGCT 8322
Query 471 GTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATC 530
|| | ||||| || ||||| || |||||||| || || | |||||||||||||||
Sbjct 8323 GTGTTGGAGTCCGTTTACAAAGATTGGTGGAAAGGCAGCTTGAGAGGACAGACCGGCATC 8382
Query 531 TTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAA 590
|| || | ||||||||||| || | |||||||| |||||||| ||| | ||||| ||
Sbjct 8383 TTTCCATTGAACTATGTCGAAAAAATACAGGATCCGACCAAGGAAGAGTTGGAGAGGGAT 8442
Query 591 GCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTG 650
|| ||||||||| | || || || | ||||||||||| || |||||||||||||| ||
Sbjct 8443 GCACAGATGGAGTCCGAGGTGTTCGGCGAGATCAAGAATGTTGAGAAGCTGCTAGCACTA 8502
Query 651 CT--------GAGCACTAGTTCGAG--TGCCGACGCTA--GGGACAATGAGGAGATCACT 698
|| ||||| || | | | ||| || | |||| | || || |||
Sbjct 8503 CTCAGTGTGGGAGCAGAAGGAGGTGGCAGGCGAGGCGAGCGGGAAGAGGAAGAAGTCAGC 8562
Query 699 TCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTAT 758
|| ||||| |||| || ||||| |||||||| ||||||||||| | | |||
Sbjct 8563 GAACTTTACCAGCGGACACTGAGTATACGACCGAAGTTAATCGAGCTCATCGCCCGGTAC 8622
Query 759 TCGCAAAAGAAGGGTAAGTGGAATC--TTTTACGCGAATTTG----TGTGTTGGCCACTG 812
||||| || | ||| ||| || | | | || || | || ||||
Sbjct 8623 TCGCAGAAAA-----AAGGGGAGTCCGTGATGCTCGGCTTGGAAGATGGTATGGC----T 8673
Query 813 ATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACT 872
| | | |||| |||||||| || || ||||||||||||||||| ||||| |||||||
Sbjct 8674 AACACGCAACAGACGATTTCACTCAACTGAACGAGAAGTTCATCAAAGCACGGCGCGACT 8733
Query 873 ACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
| ||| | | || || |||| ||||| |||||
Sbjct 8734 ATGAAGCTTTGCTCGAGTCCTCCATGTCTCAACC 8767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945514367145
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |