Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017- 04-24] 2,027 sequences; 27,920,864 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq319 246 1e-61 >seq319 Length=29678 Score = 246 bits (272), Expect = 1e-61 Identities = 389/554 (70%), Gaps = 25/554 (5%) Strand=Plus/Plus Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431 || ||||| || || || || | | || | || || ||||||||||| ||||| || Sbjct 6463 GGCACCACGGCCGCGACGGTGAGCAGAGTGAGAGCACTGTACGACTTCACTCCCTCAGAG 6522 Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491 || ||||| | ||||||||||| |||||| ||||| || || |||||||| |||||| Sbjct 6523 CCGGGCGAACTTGCTTTCCGCAAGAACGACATCATTGCAGTGCTAGAGTCTGTATACAAG 6582 Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551 || |||||||| || ||||||| || || ||||| ||||| || ||||| || ||| Sbjct 6583 GATTGGTGGAAAGGCAGCTTGCGTGGGCAAACAGGCATATTCCCGCTAAACTACGTAGAG 6642 Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611 |||||||||||||| |||||||| || |||||| | || || || ||||| |||||||| Sbjct 6643 AAGCTGCAGGATCCGACCAAGGAAGAACTCGAGCGCGATGCACAAATGGAAGCGGAAGTG 6702 Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAG---- 667 |||| |||||||| | ||||||||||||||| || || |||| ||| | ||| Sbjct 6703 TTTGGCGAGATCAAAAGCGTGGAGAAGCTGCTGGCGCTCTTGAG-TGTAGGTGGAGAAGG 6761 Query 668 -------TGCCGACGCTAGGGACA--ATGAGGAGATCACTTCGCTGTACCACAAGACAGT 718 | || || || || | | |||||||| ||| || || ||| | Sbjct 6762 CGGTGGAAGGAGAGGCGAGCGAGAAGAAGAGGAGATTGGAGAGCTCTATCAACGAACACT 6821 Query 719 GTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTG 778 ||| | || ||| |||| |||||||||| | || ||||| ||||| || ||| Sbjct 6822 TGGGATCAGACCCAAGCTGATAGAGCTCATTGCGAGATACTCGCAGAAGAAAGGCGAGTC 6881 Query 779 GAATCTTTTACGCGAATTTGT-GTGTTGGCC-----ACTGATCGTGTTCCAGATGATTTC 832 | ||| || || | | | ||||| ||||| | |||| || ||| Sbjct 6882 TATTCT----CGGGATGGGCTGGCGCTGGCCGCAATACTGA-CAGACCACAGACGACTTC 6936 Query 833 ACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCC 892 |||||||| || |||||||| ||||||||||| | || |||||| | || || ||| | Sbjct 6937 ACGCAGCTGAATGAGAAGTTTATCAAGGCACGGAGGGATTACGAAGCACTTCTCGAATCA 6996 Query 893 TCGATGTCGCAACC 906 || ||||| ||||| Sbjct 6997 TCCATGTCTCAACC 7010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945246481065