Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mycosphaerella_20sp._20Ston1_20[genbank_20GCA_5F000504405.2_202017-
04-24] 2,027 sequences; 27,920,864 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq319 246 1e-61
>seq319
Length=29678
Score = 246 bits (272), Expect = 1e-61
Identities = 389/554 (70%), Gaps = 25/554 (5%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| ||||| || || || || | | || | || || ||||||||||| ||||| ||
Sbjct 6463 GGCACCACGGCCGCGACGGTGAGCAGAGTGAGAGCACTGTACGACTTCACTCCCTCAGAG 6522
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| ||||| | ||||||||||| |||||| ||||| || || |||||||| ||||||
Sbjct 6523 CCGGGCGAACTTGCTTTCCGCAAGAACGACATCATTGCAGTGCTAGAGTCTGTATACAAG 6582
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
|| |||||||| || ||||||| || || ||||| ||||| || ||||| || |||
Sbjct 6583 GATTGGTGGAAAGGCAGCTTGCGTGGGCAAACAGGCATATTCCCGCTAAACTACGTAGAG 6642
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
|||||||||||||| |||||||| || |||||| | || || || ||||| ||||||||
Sbjct 6643 AAGCTGCAGGATCCGACCAAGGAAGAACTCGAGCGCGATGCACAAATGGAAGCGGAAGTG 6702
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAG---- 667
|||| |||||||| | ||||||||||||||| || || |||| ||| | |||
Sbjct 6703 TTTGGCGAGATCAAAAGCGTGGAGAAGCTGCTGGCGCTCTTGAG-TGTAGGTGGAGAAGG 6761
Query 668 -------TGCCGACGCTAGGGACA--ATGAGGAGATCACTTCGCTGTACCACAAGACAGT 718
| || || || || | | |||||||| ||| || || ||| |
Sbjct 6762 CGGTGGAAGGAGAGGCGAGCGAGAAGAAGAGGAGATTGGAGAGCTCTATCAACGAACACT 6821
Query 719 GTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTG 778
||| | || ||| |||| |||||||||| | || ||||| ||||| || |||
Sbjct 6822 TGGGATCAGACCCAAGCTGATAGAGCTCATTGCGAGATACTCGCAGAAGAAAGGCGAGTC 6881
Query 779 GAATCTTTTACGCGAATTTGT-GTGTTGGCC-----ACTGATCGTGTTCCAGATGATTTC 832
| ||| || || | | | ||||| ||||| | |||| || |||
Sbjct 6882 TATTCT----CGGGATGGGCTGGCGCTGGCCGCAATACTGA-CAGACCACAGACGACTTC 6936
Query 833 ACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCC 892
|||||||| || |||||||| ||||||||||| | || |||||| | || || ||| |
Sbjct 6937 ACGCAGCTGAATGAGAAGTTTATCAAGGCACGGAGGGATTACGAAGCACTTCTCGAATCA 6996
Query 893 TCGATGTCGCAACC 906
|| ||||| |||||
Sbjct 6997 TCCATGTCTCAACC 7010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945246481065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |