Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq4 176 1e-40 >seq4 Length=2630524 Score = 176 bits (194), Expect = 1e-40 Identities = 241/336 (72%), Gaps = 7/336 (2%) Strand=Plus/Plus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426 ||||||| |||||||| ||||| ||||| | ||| | || |||||||| ||| | | Sbjct 2160943 CATCTGGCACCACAGCCGCTACTGTCTCGAGAGTTAGAGCTCTTTACGATTTCCAGGCTA 2161002 Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486 | || | | || || || || || ||||| || ||||| ||| | | ||| || | Sbjct 2161003 CAGACGCAGATGAATTACAGTTTCGAAAGGGCGATATCATTGCAGTTGTAGGGTCAGTAT 2161062 Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546 | ||||| |||||| ||||| | || |||||||| || || ||||| || ||||||| Sbjct 2161063 ATAAGGATTGGTGGCGAGGTTCAATACGAGGACAGACTGGTATTTTCCCTCTAAACTATG 2161122 Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606 ||||||||||| |||||| || ||| || | | ||||||| || |||||||| | Sbjct 2161123 TCGAGAAGCTGGTGGATCCCACACCGGAAGAATTACAACGAGAAGCACAAATGGAGGCCG 2161182 Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT-----AG 661 | || ||||||||||| |||||||| |||||| | || | | |||| ||| | Sbjct 2161183 AGGTTTTTGCGGAGATTAAGAACGTAGAGAAGTTACTTACATTATTGAGTACTTCTTCAT 2161242 Query 662 TTCGAGTGCCGACGCTAGGGACAATGAGGAGATCAC 697 || | || || ||| | || |||||||||||||| Sbjct 2161243 CTCAATTG--GATGCTCGAGATAATGAGGAGATCAC 2161276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945525703470