Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq4 176 1e-40
>seq4
Length=2630524
Score = 176 bits (194), Expect = 1e-40
Identities = 241/336 (72%), Gaps = 7/336 (2%)
Strand=Plus/Plus
Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426
||||||| |||||||| ||||| ||||| | ||| | || |||||||| ||| | |
Sbjct 2160943 CATCTGGCACCACAGCCGCTACTGTCTCGAGAGTTAGAGCTCTTTACGATTTCCAGGCTA 2161002
Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486
| || | | || || || || || ||||| || ||||| ||| | | ||| || |
Sbjct 2161003 CAGACGCAGATGAATTACAGTTTCGAAAGGGCGATATCATTGCAGTTGTAGGGTCAGTAT 2161062
Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546
| ||||| |||||| ||||| | || |||||||| || || ||||| || |||||||
Sbjct 2161063 ATAAGGATTGGTGGCGAGGTTCAATACGAGGACAGACTGGTATTTTCCCTCTAAACTATG 2161122
Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606
||||||||||| |||||| || ||| || | | ||||||| || |||||||| |
Sbjct 2161123 TCGAGAAGCTGGTGGATCCCACACCGGAAGAATTACAACGAGAAGCACAAATGGAGGCCG 2161182
Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT-----AG 661
| || ||||||||||| |||||||| |||||| | || | | |||| ||| |
Sbjct 2161183 AGGTTTTTGCGGAGATTAAGAACGTAGAGAAGTTACTTACATTATTGAGTACTTCTTCAT 2161242
Query 662 TTCGAGTGCCGACGCTAGGGACAATGAGGAGATCAC 697
|| | || || ||| | || ||||||||||||||
Sbjct 2161243 CTCAATTG--GATGCTCGAGATAATGAGGAGATCAC 2161276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945525703470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |