Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq96 179 1e-41
>seq96
Length=3495428
Score = 179 bits (198), Expect = 1e-41
Identities = 212/287 (74%), Gaps = 0/287 (0%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
|| ||||| || || |||||| ||| ||||| || | | |||||| | ||||| ||
Sbjct 1256375 GGCACCACGGCTGCCACCGTCAGCCGAGTTCGTGCTCAGTTCGACTTTGCTCCCTCTGAG 1256434
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| |||||| | | ||| || |||||| | ||||| ||||||||| ||| ||||||
Sbjct 1256435 CCGGGCGAGCTCGAGTTCAAGAAGGGCGACGTCATTGCCGTTCTCGAGAGTGTTTACAAG 1256494
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||| || || || || || |||| || |||||||| | ||||| ||||||
Sbjct 1256495 GACTGGTGGCGAGGCTCCCTACGCGGGAAGACGGGTATCTTCCCTTTGAACTACGTCGAG 1256554
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||||| || || || ||| || || | | || || |||||||| || || |||
Sbjct 1256555 AAGCTATCCGACCCAACTCCGGATGAACTGCAACGCGAGGCACAGATGGAAGCCGAGGTC 1256614
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
||||| || |||||||| || ||||||||| | |||||||||||||
Sbjct 1256615 TTTGCCGAAATCAAGAATGTCGAGAAGCTGTTGACTCTGCTGAGCAC 1256661
Score = 123 bits (136), Expect = 8e-25
Identities = 165/228 (72%), Gaps = 15/228 (7%)
Strand=Plus/Plus
Query 701 GCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTC 760
||| |||||| | ||| | | || ||||||||| ||||| || | |||| ||||||||
Sbjct 1256761 GCTTTACCACCAAACACTAGCTATCCGGCCGAAGCTGATCAAGTTGATTGAAAAGTATTC 1256820
Query 761 GCAAAAGAAGGGTAAG----TGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGAT-- 814
||||||||||||||| || ||| | | | || ||||| || | |
Sbjct 1256821 CCAAAAGAAGGGTAAGGATCTGTAATTTCTGA--------TGAGTGTTACCCCTCGCTAA 1256872
Query 815 CGTGTTCC-AGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTA 873
| | ||| ||| |||||||| ||||||||||| ||||| |||||||| || || |||||
Sbjct 1256873 CAAGCTCCCAGACGATTTCACCCAGCTCAACGAAAAGTTTATCAAGGCTCGACGGGACTA 1256932
Query 874 CGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCCGGCTA 921
||| |||||||||| |||| ||| | || || ||||||| ||||
Sbjct 1256933 CGAGGCCCTCCTTGAGTCCTCTATGGCTCACCCGCCGCAGCCTAGCTA 1256980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945570002340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |