Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neurospora_20crassa_20[genbank_20GCA_5F000786625.1_202014-11-25] 358 sequences; 40,416,174 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq7 187 8e-44 >seq7 Length=444819 Score = 187 bits (206), Expect = 8e-44 Identities = 199/263 (76%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 375 ACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCC 434 ||||| || |||||||| |||||||| | || || |||||||| |||||||| || Sbjct 380552 ACCACGGCCGCTACCGTGTCCCGCGTCAGGGCGCTCTACGACTTTGTCCCCTCGGAGCCG 380611 Query 435 GGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGAC 494 |||||| ||| ||| || || || | ||||| || | || ||||||||||| Sbjct 380612 GGCGAGCTGGAGTTCAAAAAGGGTGATGTCATTGCCGTGTTGAAGAGCGTGTACAAGGAT 380671 Query 495 TGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAG 554 ||||||| |||||||| || |||| ||||||||||| || ||||||||||| ||| Sbjct 380672 TGGTGGAGCGGTTCTCTCAAGGGCAAGACGGGCATCTTCCCTCTGAACTATGTCGAAAAG 380731 Query 555 CTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTT 614 ||| ||| || ||| ||||||| | || | || || ||||||||||| || || ||| Sbjct 380732 CTGGCGGACCCGACCCCGGAGGAGTTGCAGCGTGAGGCGCAGATGGAGGCCGAGGTGTTT 380791 Query 615 GCGGAGATCAAGAACGTGGAGAA 637 |||||||||||||| ||||| || Sbjct 380792 GCGGAGATCAAGAATGTGGAAAA 380814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945537563010