Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1 244 3e-61 >seq1 Length=3145143 Score = 244 bits (270), Expect = 3e-61 Identities = 392/556 (71%), Gaps = 23/556 (4%) Strand=Plus/Plus Query 363 ATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACG 422 ||| | || |||||||| || || || ||||| || |||||||||||||| || ||| Sbjct 1017123 ATTCCCTCCGGAACCACCGCTGCCACGGTCTCTCGTGTTCGCGCCCTTTATGATTTCCAA 1017182 Query 423 CCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCT 482 ||||| || || || || | |||| || || ||||||||||| ||| | ||||| Sbjct 1017183 CCCTCTGAGCCTGGAGAACTTCAGTTCCAGAAGGGTGACATTATTGCTGTTTTGGAGTCC 1017242 Query 483 GTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAAC 542 | ||||||||| ||||||||||| || || ||||| || ||||| || || | ||| Sbjct 1017243 GCGTACAAGGATTGGTGGAAGGGATCGCTCCGTGGCCAAGTGGGCATTTTTCCTTTGAAC 1017302 Query 543 TATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAG 602 |||||||||||||| ||||||||| |||||||||| || | |||||||| ||||| Sbjct 1017303 TATGTCGAGAAGCTTTCAGATCCTACCCAGGAGGAGCTACAGCGGGAAGCTCAAATGGAA 1017362 Query 603 GCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC---T 659 || || || ||||| || || |||||||| |||||||| | |||||| | ||||| Sbjct 1017363 GCCGAGGTTTTTGCTGAAATAAAGAACGTCGAGAAGCTTTTGGCTCTGTTAAGCACAAAC 1017422 Query 660 AGTTC-GAGTGCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGT 718 || || |||| | | | || ||||| || || ||| || |||||| ||| | Sbjct 1017423 AGCTCTGAGT-TGAATGTTCAAGAAAATGAAGAAATTACTAAACTATACCACTCGACCCT 1017481 Query 719 GTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG-- 776 |||| || || || || || ||| | ||||| || ||||| | || ||||||||| Sbjct 1017482 TGCGATTCGACCAAAATTAATTGAGTTGATTGGTAAATATTCTAAGAAAAAGGGTAAGAC 1017541 Query 777 --TGGAATCTTTTA----CGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATT 830 | ||| | ||| ||||| | | || | ||| | ||||||| | Sbjct 1017542 TTTTGAA-CGGTTAGGCCGGCGAAATACT-TGCT-AACACCAA-------GCAGATGACT 1017591 Query 831 TCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAG 890 |||||||||| ||||||||||| ||||| || || | || || || || | | |||| Sbjct 1017592 TCACGCAGCTTAACGAGAAGTTTATCAAAGCTCGAAGGGATTATGAGGCCTTATTAGAAG 1017651 Query 891 CCTCGATGTCGCAACC 906 | || ||||| || || Sbjct 1017652 CGTCTATGTCACACCC 1017667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945593198205