Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophiognomonia_20clavigignenti- juglandacearum_20[genbank_20GCA_5F000220195.1_202011-07-07] 28,868 sequences; 15,906,360 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1059 163 9e-37 >seq1059 Length=328 Score = 163 bits (180), Expect = 9e-37 Identities = 238/330 (72%), Gaps = 15/330 (5%) Strand=Plus/Plus Query 537 CTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAG 596 |||||||| |||||||||||| ||| || || |||||| | || | || || ||| Sbjct 3 CTCAACTACGTCGAGAAGCTGACGGACCCGACGCCCGAGGAGTTGCAGCGTGAGGCGCAG 62 Query 597 ATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 |||||||| || || ||||| ||||||||||| |||||||||||| | | ||||||||| Sbjct 63 ATGGAGGCCGAGGTGTTTGCCGAGATCAAGAATGTGGAGAAGCTGTTGACGCTGCTGAGC 122 Query 657 ACTAGTTCGAGTGCCGACGCTAG--GGACAATGAGGAGATCACTTCGCTGTACCACAAGA 714 || | | || | |||| || || ||||| |||||||| | |||||| || ||| Sbjct 123 ACCAATGCG-GCGCCG-CGGGAGGAGGACAGCGAGGAGATTTCCAAGCTGTATCATCAGA 180 Query 715 CAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTA 774 | || |||| ||||| ||| | ||| ||||||||| |||||||| || || || ||| Sbjct 181 CGTTGGCGATTCGGCCAAAGCTAATCAAGCTCATTGAGAAGTATTCTCAGAA-AAAGGTG 239 Query 775 AGTGGAATCTTTTACG-----CGAATTTGTGTGTTGGCCA----CTGATCGTGTTCCAGA 825 ||| | | | || | |||| ||| ||||| |||| | | || |||| Sbjct 240 AGTTGCGTGTGGTATGGAGGTCGAA-TTGACGACAGGCCAGTCGCTGACCATCTTGCAGA 298 Query 826 TGATTTCACGCAGCTCAACGAGAAGTTCAT 855 ||||| || || || |||||||||||||| Sbjct 299 CGATTTTACACAACTGAACGAGAAGTTCAT 328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15940565276460