Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201 6-08-25] 1,368 sequences; 29,399,910 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq766 269 8e-69 >seq766 Length=17196 Score = 269 bits (298), Expect = 8e-69 Identities = 410/580 (71%), Gaps = 28/580 (5%) Strand=Plus/Minus Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426 |||||||||| || ||||| || || || |||||| | || | || ||||| ||||| Sbjct 14871 CATCTGGAACGACTGCAGCGACTGTATCTCGCGTTAGAGCTTTGTATGACTTTCAGCCCT 14812 Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486 | |||||||| || | || |||| || || ||||||| || ||||| ||||| | Sbjct 14811 CCGAACCCGGAGAACTCCAGTTTCGCAGGGGTGATGTTATTGCAGTCCTCGAATCTGTTT 14752 Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546 ||||||||||||||||||| ||| |||| || ||||||||||| || ||||| ||||| | Sbjct 14751 ACAAGGACTGGTGGAAGGGATCTTTGCGCGGCCAGACCGGCATTTTTCCCCTAAACTACG 14692 Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606 | || || || || || ||| | ||||| ||| | |||||||| || ||||| || | Sbjct 14691 TTGAAAAACTTTCAGACCCAACCCAAGAGGAACTCCAAAGAGAAGCGCAAATGGAAGCTG 14632 Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAG---TT 663 |||| || || ||||| || || ||||||||||| ||| | || ||||||| || | Sbjct 14631 AAGTGTTCGCAGAGATTAAAAATGTGGAGAAGCTTCTAACACTTTTGAGCACCAGCAACT 14572 Query 664 CGAGTGC-CGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCG 722 | || || | | | ||| || ||||| ||||| | || ||||| || | | Sbjct 14571 C-AGAGCTCAATGTCCAGGAGAACGAGGAAATCACAACCCTTTACCATTCAACTCTTGCT 14513 Query 723 ATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAAT 782 ||||| || || | || ||||| ||||| || || || || |||||||||| ||| Sbjct 14512 ATACGACCAAAACTCATTGAGCTGATTGGTAAATACTCACAGAAGAAGGGTACGTG---- 14457 Query 783 CTTTTACGCGAATTTGTGTG----TTGGCCACTGATCGTG-----TTC----CAGATGAT 829 ||| | ||||||||| ||| | ||| | || ||| |||||| Sbjct 14456 -TTT-----GCATTTGTGTGTCACTTGTCAACTAGTTTTGCTGACTTCTTCGAAGATGAC 14403 Query 830 TTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAA 889 |||||||| || || |||||||||||||| || || | |||||||| | | ||||| Sbjct 14402 TTCACGCAACTGAATGAGAAGTTCATCAAAGCTCGTAGGGACTACGAGTCTTTGCTTGAG 14343 Query 890 GCCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCGTC 929 || |||||| | || || || ||||| ||||| |||| Sbjct 14342 GCATCGATGGCTCATCCGGCTCAGCCGCATTACGGACGTC 14303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945361413960