Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paracoccidioides_20brasiliensis_20[genbank_20GCA_5F001713645.1_20201
6-08-25] 1,368 sequences; 29,399,910 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq766 269 8e-69
>seq766
Length=17196
Score = 269 bits (298), Expect = 8e-69
Identities = 410/580 (71%), Gaps = 28/580 (5%)
Strand=Plus/Minus
Query 367 CATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCT 426
|||||||||| || ||||| || || || |||||| | || | || ||||| |||||
Sbjct 14871 CATCTGGAACGACTGCAGCGACTGTATCTCGCGTTAGAGCTTTGTATGACTTTCAGCCCT 14812
Query 427 CGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGT 486
| |||||||| || | || |||| || || ||||||| || ||||| ||||| |
Sbjct 14811 CCGAACCCGGAGAACTCCAGTTTCGCAGGGGTGATGTTATTGCAGTCCTCGAATCTGTTT 14752
Query 487 ACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATG 546
||||||||||||||||||| ||| |||| || ||||||||||| || ||||| ||||| |
Sbjct 14751 ACAAGGACTGGTGGAAGGGATCTTTGCGCGGCCAGACCGGCATTTTTCCCCTAAACTACG 14692
Query 547 TCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGG 606
| || || || || || ||| | ||||| ||| | |||||||| || ||||| || |
Sbjct 14691 TTGAAAAACTTTCAGACCCAACCCAAGAGGAACTCCAAAGAGAAGCGCAAATGGAAGCTG 14632
Query 607 AAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAG---TT 663
|||| || || ||||| || || ||||||||||| ||| | || ||||||| || |
Sbjct 14631 AAGTGTTCGCAGAGATTAAAAATGTGGAGAAGCTTCTAACACTTTTGAGCACCAGCAACT 14572
Query 664 CGAGTGC-CGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCG 722
| || || | | | ||| || ||||| ||||| | || ||||| || | |
Sbjct 14571 C-AGAGCTCAATGTCCAGGAGAACGAGGAAATCACAACCCTTTACCATTCAACTCTTGCT 14513
Query 723 ATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAAT 782
||||| || || | || ||||| ||||| || || || || |||||||||| |||
Sbjct 14512 ATACGACCAAAACTCATTGAGCTGATTGGTAAATACTCACAGAAGAAGGGTACGTG---- 14457
Query 783 CTTTTACGCGAATTTGTGTG----TTGGCCACTGATCGTG-----TTC----CAGATGAT 829
||| | ||||||||| ||| | ||| | || ||| ||||||
Sbjct 14456 -TTT-----GCATTTGTGTGTCACTTGTCAACTAGTTTTGCTGACTTCTTCGAAGATGAC 14403
Query 830 TTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAA 889
|||||||| || || |||||||||||||| || || | |||||||| | | |||||
Sbjct 14402 TTCACGCAACTGAATGAGAAGTTCATCAAAGCTCGTAGGGACTACGAGTCTTTGCTTGAG 14343
Query 890 GCCTCGATGTCGCAACCAGCGCAGCCCGGCTACGGTCGTC 929
|| |||||| | || || || ||||| ||||| ||||
Sbjct 14342 GCATCGATGGCTCATCCGGCTCAGCCGCATTACGGACGTC 14303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945361413960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |