Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016- 05-11] 61 sequences; 38,464,024 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq13 394 3e-106 >seq13 Length=1013749 Score = 394 bits (436), Expect = 3e-106 Identities = 649/925 (70%), Gaps = 47/925 (5%) Strand=Plus/Minus Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68 ||||| |||||||||||||| ||| || ||| |||| ||||||||||| | || ||| Sbjct 821279 AAGGCCAAGATCCTCGAGCGCATGTCAGAGTGGTCGGATATGTTCGCCAGAGATCCAGAT 821220 Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAACTC 128 || ||||||||| || |||||| |||| | ||| | || ||| ||| | | || Sbjct 821219 CTCGGCATCATGCAGGGGGCCTACGAGAGGTTGAAGTCGCAGAGTACGTCAAAA-AGCTG 821161 Query 129 TGGT------TCGTTGGGAGC-ACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCC 181 || | | |||| | ||||||| ||| ||||||| |||||||| ||||| Sbjct 821160 TGCTGAAAAGTGATTGGCATAGACTGACC-----GTTTTAGACCCAAACCTGCGCCCTCC 821106 Query 182 GTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCT 241 ||||| || || |||||||| ||||| ||| ||| ||||||||||||||||||||||| Sbjct 821105 TTCGAAGCCGCAAAAGACCCAAATCACCGACGTGGATCGCCAGAAGGAAGAGGAGGAGCT 821046 Query 242 ACAGATGGCGCTGGCACTCTCCGTCAAGGAA---AGCGGGACCGAGCCATCCGCCGCCAG 298 |||||||| || || | || | ||| | || | | || || | ||| Sbjct 821045 CCAGATGGCACTTGCCATGTCGATACGGGAGTCGAAAGGTGCAGCACCGTCGTCATCCAA 820986 Query 299 GTCCAACCAGCCGCAAGCAAAAGCCCCAC-AAC--AATCCGCCCCGGAACAAGAGC-AGC 354 ||| ||| ||||| | | | || ||| || | | | || | | || ||| Sbjct 820985 GTCAAACGCCCCGCAGG---ATTCGACAGGAACCGAAGGCTCTCAGGCTGATGCGCCAGC 820929 Query 355 ATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACG 414 ||| | | | | || || || ||||| ||||| || || || || || || |||| Sbjct 820928 C-CAACCGGTCCCCGCAGGCACGACTGCAGCAACCGTGTCACGAGTACGTGCGCTCTACG 820870 Query 415 ACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTC 474 ||||| ||| || ||||| || |||||| ||| | || ||||| | || ||||| | Sbjct 820869 ACTTCCAGCCGTCAGAACCAGGAGAGTTGCAGTTCAGAAAGGGCGATGTCATCGCGGTGC 820810 Query 475 TCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCC 534 ||||||| || ||||||||||||||||| || || ||||| || |||||||| ||||||| Sbjct 820809 TCGAGTCAGTATACAAGGACTGGTGGAAAGGCTCACTGCGCGGCCAGACCGGTATCTTCC 820750 Query 535 CCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTC 594 | | ||||| || || ||||| ||||| || || | ||||| ||| | || || | Sbjct 820749 CGTTGAACTACGTGGAAAAGCTACAGGACCCCACGCCACAAGAGCTGGAGCGGGAGGCGC 820690 Query 595 AGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGA 654 |||||||||| ||||| ||||| |||||| ||| |||||||| ||||| || |||||| Sbjct 820689 AGATGGAGGCAGAAGTTTTTGCACAGATCAGGAATGTGGAGAAACTGCTCGCGTTGCTGA 820630 Query 655 GCACTAGTTCG---AGT---GCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACC 708 | || | ||| ||| | || || || || || ||||| |||| |||||| | Sbjct 820629 GTACCACGTCGCAAAGTGGAGGTGATGCGAGAGAGAACGAGGAAGTCACGGAGCTGTATC 820570 Query 709 ACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGA 768 || |||| |||| || || |||||| |||| ||||||||| |||||||||||||||| Sbjct 820569 ACTCGACACTGTCCATTCGACCGAAGCTGATTGAGCTCATTCAGAAGTATTCGCAAAAGA 820510 Query 769 AGGGTAA-------GTGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTC 821 ||||||| || || | || | || | | | |||| | || Sbjct 820509 AGGGTAAGCACGCCGTTGA--CATTCAGAACAAAATCAGGG-------CTGA-CTTGAGG 820460 Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881 ||| |||||||| ||| | |||||||||||||||||||| || || ||||| || ||| Sbjct 820459 TAGACGATTTCACACAGTTGAACGAGAAGTTCATCAAGGCGCGACGAGACTATGAGTCCC 820400 Query 882 TCCTTGAAGCCTCGATGTCGCAACC 906 | ||||| || |||||| | ||||| Sbjct 820399 TGCTTGAGGCATCGATGGCACAACC 820375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945589361295