Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Paraphaeosphaeria_20sporulosa_20[genbank_20GCA_5F001642045.1_202016-
05-11] 61 sequences; 38,464,024 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq13 394 3e-106
>seq13
Length=1013749
Score = 394 bits (436), Expect = 3e-106
Identities = 649/925 (70%), Gaps = 47/925 (5%)
Strand=Plus/Minus
Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68
||||| |||||||||||||| ||| || ||| |||| ||||||||||| | || |||
Sbjct 821279 AAGGCCAAGATCCTCGAGCGCATGTCAGAGTGGTCGGATATGTTCGCCAGAGATCCAGAT 821220
Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAACTC 128
|| ||||||||| || |||||| |||| | ||| | || ||| ||| | | ||
Sbjct 821219 CTCGGCATCATGCAGGGGGCCTACGAGAGGTTGAAGTCGCAGAGTACGTCAAAA-AGCTG 821161
Query 129 TGGT------TCGTTGGGAGC-ACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCC 181
|| | | |||| | ||||||| ||| ||||||| |||||||| |||||
Sbjct 821160 TGCTGAAAAGTGATTGGCATAGACTGACC-----GTTTTAGACCCAAACCTGCGCCCTCC 821106
Query 182 GTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCT 241
||||| || || |||||||| ||||| ||| ||| |||||||||||||||||||||||
Sbjct 821105 TTCGAAGCCGCAAAAGACCCAAATCACCGACGTGGATCGCCAGAAGGAAGAGGAGGAGCT 821046
Query 242 ACAGATGGCGCTGGCACTCTCCGTCAAGGAA---AGCGGGACCGAGCCATCCGCCGCCAG 298
|||||||| || || | || | ||| | || | | || || | |||
Sbjct 821045 CCAGATGGCACTTGCCATGTCGATACGGGAGTCGAAAGGTGCAGCACCGTCGTCATCCAA 820986
Query 299 GTCCAACCAGCCGCAAGCAAAAGCCCCAC-AAC--AATCCGCCCCGGAACAAGAGC-AGC 354
||| ||| ||||| | | | || ||| || | | | || | | || |||
Sbjct 820985 GTCAAACGCCCCGCAGG---ATTCGACAGGAACCGAAGGCTCTCAGGCTGATGCGCCAGC 820929
Query 355 ATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACG 414
||| | | | | || || || ||||| ||||| || || || || || || ||||
Sbjct 820928 C-CAACCGGTCCCCGCAGGCACGACTGCAGCAACCGTGTCACGAGTACGTGCGCTCTACG 820870
Query 415 ACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTC 474
||||| ||| || ||||| || |||||| ||| | || ||||| | || ||||| |
Sbjct 820869 ACTTCCAGCCGTCAGAACCAGGAGAGTTGCAGTTCAGAAAGGGCGATGTCATCGCGGTGC 820810
Query 475 TCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCC 534
||||||| || ||||||||||||||||| || || ||||| || |||||||| |||||||
Sbjct 820809 TCGAGTCAGTATACAAGGACTGGTGGAAAGGCTCACTGCGCGGCCAGACCGGTATCTTCC 820750
Query 535 CCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTC 594
| | ||||| || || ||||| ||||| || || | ||||| ||| | || || |
Sbjct 820749 CGTTGAACTACGTGGAAAAGCTACAGGACCCCACGCCACAAGAGCTGGAGCGGGAGGCGC 820690
Query 595 AGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGA 654
|||||||||| ||||| ||||| |||||| ||| |||||||| ||||| || ||||||
Sbjct 820689 AGATGGAGGCAGAAGTTTTTGCACAGATCAGGAATGTGGAGAAACTGCTCGCGTTGCTGA 820630
Query 655 GCACTAGTTCG---AGT---GCCGACGCTAGGGACAATGAGGAGATCACTTCGCTGTACC 708
| || | ||| ||| | || || || || || ||||| |||| |||||| |
Sbjct 820629 GTACCACGTCGCAAAGTGGAGGTGATGCGAGAGAGAACGAGGAAGTCACGGAGCTGTATC 820570
Query 709 ACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGA 768
|| |||| |||| || || |||||| |||| ||||||||| ||||||||||||||||
Sbjct 820569 ACTCGACACTGTCCATTCGACCGAAGCTGATTGAGCTCATTCAGAAGTATTCGCAAAAGA 820510
Query 769 AGGGTAA-------GTGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTC 821
||||||| || || | || | || | | | |||| | ||
Sbjct 820509 AGGGTAAGCACGCCGTTGA--CATTCAGAACAAAATCAGGG-------CTGA-CTTGAGG 820460
Query 822 CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCC 881
||| |||||||| ||| | |||||||||||||||||||| || || ||||| || |||
Sbjct 820459 TAGACGATTTCACACAGTTGAACGAGAAGTTCATCAAGGCGCGACGAGACTATGAGTCCC 820400
Query 882 TCCTTGAAGCCTCGATGTCGCAACC 906
| ||||| || |||||| | |||||
Sbjct 820399 TGCTTGAGGCATCGATGGCACAACC 820375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945589361295
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |