Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2 257 5e-65 >seq2 Length=3819764 Score = 257 bits (284), Expect = 5e-65 Identities = 389/551 (71%), Gaps = 7/551 (1%) Strand=Plus/Minus Query 368 ATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTC 427 ||| || || ||| |||||| || || ||||| | ||||| | ||||||| || || Sbjct 827966 ATCAGGCACGTCAGTAGCTACTGTGTCGCGCGTGAGAGCCCTGTTCGACTTCCAACCTTC 827907 Query 428 GGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487 || ||||| || | ||||| ||||||||||||||||| || |||||||| || || Sbjct 827906 TGAGCCCGGGGAACTCCAATTCCGGAAAGGCGACATTATTGCAGTCCTCGAGTCAGTTTA 827847 Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547 |||||||||||||||||| ||| || | || |||||||| || || || |||||||| || Sbjct 827846 CAAGGACTGGTGGAAGGGATCTTTGAGAGGCCAGACCGGAATTTTTCCTCTCAACTACGT 827787 Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607 || ||||||| || || || ||| ||||| || |||| |||||||||||||| || Sbjct 827786 GGAAAAGCTGCCTGACCCGACTGTGGACGAGCTGCAGCGAGAGGCTCAGATGGAGGCAGA 827727 Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAG 667 ||||||| | || |||| || || ||||| || | |||||||||| | | Sbjct 827726 TGTCTTTGGTCAAATTAAGAGTGTTGAAAAGCTCCTTACATTGCTGAGCACCCGCAACAC 827667 Query 668 TGCC---GACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGAT 724 | | ||| ||| ||||||||||||| || ||| | || | ||| Sbjct 827666 AGACCTTAACGTCTCGGAAAATGAGGAGATCAGCAATCTCTACGAGGCTACTCTTAAGAT 827607 Query 725 ACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCT 784 || || ||| | |||||| | ||||||||||||||||| ||||| ||||||| | || Sbjct 827606 CCGTCCAAAGCTTATCGAGTTGATTGGCAAGTATTCGCAGAAGAAAGGTAAGTACTA-CT 827548 Query 785 TTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAAC 844 ||| ||| | | | || || | ||||||| ||||| |||||||| Sbjct 827547 CCTAC---AATCGCCGAGGATTTCGCTCATAAATATGCAGATGAATTCACTCAGCTCAAT 827491 Query 845 GAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAA 904 |||||||| ||||| || || || || || || |||| || || || |||||| | || Sbjct 827490 GAGAAGTTTATCAAAGCTCGTCGTGATTATGAGTCCCTGCTGGAGGCATCGATGGCTCAT 827431 Query 905 CCAGCGCAGCC 915 || || ||||| Sbjct 827430 CCCGCACAGCC 827420 Score = 86.0 bits (94), Expect = 2e-13 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | |||||||| ||||| |||| |||||||| |||||||||| ||||| | Sbjct 828371 TCAAGTCGAAGATCCTGGAGCGCATGGAGGAATGGACAAAGATGTTCGCGTCCAACCCCG 828312 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGA 96 | |||| |||||||||||||| ||||||| Sbjct 828311 ACTTTGGTATCATGGAGCAGGCTTATATGA 828282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945588663675