Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2 257 5e-65
>seq2
Length=3819764
Score = 257 bits (284), Expect = 5e-65
Identities = 389/551 (71%), Gaps = 7/551 (1%)
Strand=Plus/Minus
Query 368 ATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTC 427
||| || || ||| |||||| || || ||||| | ||||| | ||||||| || ||
Sbjct 827966 ATCAGGCACGTCAGTAGCTACTGTGTCGCGCGTGAGAGCCCTGTTCGACTTCCAACCTTC 827907
Query 428 GGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487
|| ||||| || | ||||| ||||||||||||||||| || |||||||| || ||
Sbjct 827906 TGAGCCCGGGGAACTCCAATTCCGGAAAGGCGACATTATTGCAGTCCTCGAGTCAGTTTA 827847
Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547
|||||||||||||||||| ||| || | || |||||||| || || || |||||||| ||
Sbjct 827846 CAAGGACTGGTGGAAGGGATCTTTGAGAGGCCAGACCGGAATTTTTCCTCTCAACTACGT 827787
Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607
|| ||||||| || || || ||| ||||| || |||| |||||||||||||| ||
Sbjct 827786 GGAAAAGCTGCCTGACCCGACTGTGGACGAGCTGCAGCGAGAGGCTCAGATGGAGGCAGA 827727
Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAG 667
||||||| | || |||| || || ||||| || | |||||||||| | |
Sbjct 827726 TGTCTTTGGTCAAATTAAGAGTGTTGAAAAGCTCCTTACATTGCTGAGCACCCGCAACAC 827667
Query 668 TGCC---GACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGAT 724
| | ||| ||| ||||||||||||| || ||| | || | |||
Sbjct 827666 AGACCTTAACGTCTCGGAAAATGAGGAGATCAGCAATCTCTACGAGGCTACTCTTAAGAT 827607
Query 725 ACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCT 784
|| || ||| | |||||| | ||||||||||||||||| ||||| ||||||| | ||
Sbjct 827606 CCGTCCAAAGCTTATCGAGTTGATTGGCAAGTATTCGCAGAAGAAAGGTAAGTACTA-CT 827548
Query 785 TTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAAC 844
||| ||| | | | || || | ||||||| ||||| ||||||||
Sbjct 827547 CCTAC---AATCGCCGAGGATTTCGCTCATAAATATGCAGATGAATTCACTCAGCTCAAT 827491
Query 845 GAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAA 904
|||||||| ||||| || || || || || || |||| || || || |||||| | ||
Sbjct 827490 GAGAAGTTTATCAAAGCTCGTCGTGATTATGAGTCCCTGCTGGAGGCATCGATGGCTCAT 827431
Query 905 CCAGCGCAGCC 915
|| || |||||
Sbjct 827430 CCCGCACAGCC 827420
Score = 86.0 bits (94), Expect = 2e-13
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66
||||| | |||||||| ||||| |||| |||||||| |||||||||| ||||| |
Sbjct 828371 TCAAGTCGAAGATCCTGGAGCGCATGGAGGAATGGACAAAGATGTTCGCGTCCAACCCCG 828312
Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGA 96
| |||| |||||||||||||| |||||||
Sbjct 828311 ACTTTGGTATCATGGAGCAGGCTTATATGA 828282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945588663675
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |