Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq597 241 4e-60 >seq597 Length=435025 Score = 241 bits (266), Expect = 4e-60 Identities = 632/951 (66%), Gaps = 59/951 (6%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | ||||| || ||||| |||| |||||||| |||||||| | ||||| | Sbjct 45718 TCAAGTCTAAGATTCTGGAGCGCATGGAAGAATGGACTGAGATGTTTTCATCCAACCCCG 45659 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGT--GATCA 124 || ||||||||||||| ||||| || |||| | || || ||| || | | || Sbjct 45658 ATTTTGGCATCATGGAACAGGCATACATGAAATTAAAAACCACGAGTAAGTATCTGTTCT 45599 Query 125 ACTC-TGGTTCGTTGGGAGCA-CTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCCG 182 | | | | | ||| | |||| | | || |||||| || |||| || ||| Sbjct 45598 GCGCCTTGAATATCGGGCTCGGCTGATTA---TATTCCAGACCCGAATCTGCAGCCACCG 45542 Query 183 TCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTA 242 ||||||||| ||| ||||||| ||| || || |||| ||| || ||||| || Sbjct 45541 TCGAAACCTGGAAAGCGTGAGATCACCGACGTTGATCGTCAGATGGAGGAAGAGGAACTG 45482 Query 243 CAGATGGCGCTGGCACTCTCCGTCAAGGA--AAGCGGGACCGAGC-CATCCGCCGC--CA 297 |||||||| || |||||||| | ||||| |||| | ||| | | | || || || Sbjct 45481 CAGATGGCCCTAGCACTCTCGATTAAGGATAAAGCAGCCCCGGCCGCGGCTGCTGCGGCA 45422 Query 298 GGTCCAACCAGCCGCAAGCAAAA------GCC----CCACAACAATCCGCCCCGGAA--C 345 | || | ||| | | || ||| | | || ||||| || | Sbjct 45421 GCACCC-CGAGCGG-AGGCTTCGTCTGCTGCCGTTGCGTCGGCATCGGGCCCCACAAATC 45364 Query 346 AAGAGCAGCAT---------CAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCC 396 ||| | ||| |||||| || || || || | | ||||||||| || | Sbjct 45363 AAGGGGAGCCCGCCGAGGCCCAAGCTCTTTCA---GGTACATCGGTAGCTACCGTGTCAC 45307 Query 397 GCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAG 456 | || | || | | ||||||| || || || || || ||| | ||||| |||| Sbjct 45306 GTGTGAGGGCGTTGTTCGACTTCCAACCGTCTGAGCCAGGAGAGCTTCAATTCCGGAAAG 45247 Query 457 GCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTG 516 |||| | ||||| || || |||||||| |||||||| ||||||||||| || ||| | | Sbjct 45246 GCGATACGATTGCAGTCCTAGAGTCTGTTTACAAGGATTGGTGGAAGGGCTCCCTGAGAG 45187 Query 517 GACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGG 576 | |||||||| || ||||| |||||||| || ||||| || | || || || || | Sbjct 45186 GCCAGACCGGAATTTTCCCTCTCAACTACGTGGAGAAACTCCCAGACCCCACTGTTGATG 45127 Query 577 AGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGA 636 |||| || | |||||||| ||||||||||| ||||||| ||||||||| || |||| Sbjct 45126 AGCTGCAGCGGGAAGCTCAAATGGAGGCGGACGTCTTTGGTCAGATCAAGAGTGTCGAGA 45067 Query 637 AGCTGCTAGCTCTGCTGAGCACTAGTTCGAGTG---CCGACGCTAGGGACAATGAGGAGA 693 |||| | |||| |||||||| | | | | | | ||| || || |||| Sbjct 45066 AGCTCTTGACTCTACTGAGCACCCGCAACACAGACCTCAATGTCCAGGAAAACGAAGAGA 45007 Query 694 TCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCA 753 |||| | ||||| || || | | || || |||||| | ||||| | ||||| | Sbjct 45006 TCACAACTCTGTATCAAGCTACGCTTGCTATTCGTCCGAAGCTCATCGAATTGATTGGGA 44947 Query 754 AGTATTCGCAAAAGAAGGGTA-------AGTGGAATCT-TTTACGCGAATTTGTGTGTTG 805 |||||||||||||||| |||| ||| | | | || | || || | | Sbjct 44946 AGTATTCGCAAAAGAAAGGTAATCAGCCAGTCGTTTGTCTTGCCACGGATGTCT------ 44893 Query 806 GCCACTGAT-CGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACG 864 | || || | || || |||||| ||||| ||||| || |||||||||||||| || || Sbjct 44892 --CGCTTATACATG-TCTAGATGAATTCACCCAGCTTAATGAGAAGTTCATCAAAGCTCG 44836 Query 865 CCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 |||||||| || |||||||||| || ||| | | || || || ||||| Sbjct 44835 TCGCGACTATGAGTCCCTCCTTGAGGCATCGCTAGCCCACCCGGCACAGCC 44785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945399259845