Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769735.1_202014-10-28] 270 sequences; 32,065,046 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq230 289 9e-75 >seq230 Length=667611 Score = 289 bits (320), Expect = 9e-75 Identities = 632/926 (68%), Gaps = 49/926 (5%) Strand=Plus/Minus Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68 ||| | ||||| || ||||| |||| |||||||| ||||||||||| ||||| ||| Sbjct 532984 AAGTCTAAGATTCTGGAGCGCATGGAAGAATGGACTGAGATGTTCGCATCCAACCCGGAT 532925 Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGT--GATCAAC 126 ||||||||||||| ||||| || |||| | || ||| ||| || | | || || Sbjct 532924 TTTGGCATCATGGAACAGGCATACATGAAATTAAAAACAACGAGTAAGTATCTGTTCTAC 532865 Query 127 TCTGGTTCGT-TGGGAGCACTGAC-CAACGTGTTGTAGACCCTAACCTGCGACCTCCGTC 184 || || | | | || | ||| || | || ||||||| || |||| || ||||| Sbjct 532864 -CTCGTGAATATCCGGGCTC-GACTCATAATATTCTAGACCCGAATCTGCAGCCACCGTC 532807 Query 185 GAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTACA 244 ||||||| ||| ||||||| || || || |||| |||||| ||||| | || Sbjct 532806 GAAACCTGGAAAGCGTGAGATCACCGATGTTGATCGTCAGATGGAAGAAGAGGAATTGCA 532747 Query 245 GATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACC---GAGCCATCCGCCGC--CAGG 299 |||||| || || || || | ||||| | | ||| | | | | ||||| ||| Sbjct 532746 GATGGCCCTAGCCCTGTCTATTAAGGATAAAGCAACCCCGGCGGCTGCTGCCGCGGCAGC 532687 Query 300 TCCAACCAGCCGCAAGCAAAAGCCCCA-------CAACA--ATCCGC-CCCGGAA--CAA 347 || | |||| || || | | || | ||| || ||| || ||| Sbjct 532686 ACCT-CGAGCC-CAGGCTTCGTCTGCTGCTGTTGCATCGGCATCGGCTCCCACAAATCAA 532629 Query 348 GAGCAGCA---------TCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGC 398 ||| ||| |||| || | || || || ||| ||||||||| || ||| Sbjct 532628 GAGGAGCCCACCGAGACTCAACCTGCTCTCTCAGGTACATCAGTAGCTACCGTGTCGCGC 532569 Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458 || | || | | ||||||| || || || || || ||| | |||||||||||| Sbjct 532568 GTGAGAGCATTGTTCGACTTCCAACCGTCTGAGCCAGGAGAGCTTCAATTCCGCAAAGGC 532509 Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518 || | |||||| ||||| |||||||| |||||||| ||||||||||| || ||| | ||| Sbjct 532508 GATACTATTGCAGTTCTGGAGTCTGTCTACAAGGATTGGTGGAAGGGCTCCCTGAGAGGA 532449 Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578 || |||||||| ||||| ||||||||||| ||||| || | ||||| || || ||| Sbjct 532448 CAAACCGGCATTTTCCCTCTCAACTATGTGGAGAAACTCCCAGATCCCACTGTCGATGAG 532389 Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 || || | || ||||| ||||| ||||| ||||||| | ||||||||| || |||||| Sbjct 532388 CTGCAGCGGGAGGCTCAAATGGAAGCGGACGTCTTTGGGCAGATCAAGAGTGTCGAGAAG 532329 Query 639 CTGCTAGCTCTGCTGAGCACTAGT--TCGAGTGC-CGACGCTAGGGACAATGAGGAGATC 695 || || |||| |||||||| || | || | | | | | || || || ||||| Sbjct 532328 CTTCTGACTCTACTGAGCACCCGTAATACAGACCTCAATGTTCAAGAAAACGAAGAGATT 532269 Query 696 ACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAG 755 ||| | || || || || | |||| || || ||| | ||||| | ||||| || Sbjct 532268 ACTACACTCTATCAAGCTACGCTTGCGATTCGTCCAAAGCTCATCGAATTGATTGGGAAA 532209 Query 756 TATTCGCAAAAGAAGGGTAAGTGG--AATC---TTTTACGCGAATTTGTGTGTTGGCCAC 810 |||||||| ||||| |||||| | | || | || || | || |||| | | Sbjct 532208 TATTCGCAGAAGAAAGGTAAGCAGCCAGTCGTTTGTTTTGCCA---TGGATGTT--TCGC 532154 Query 811 TGA-TCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCG 869 | | | || || |||||| ||||| |||||||| || ||||||||||| || || |||| Sbjct 532153 TTACACATG-TCTAGATGAATTCACCCAGCTCAATGAAAAGTTCATCAAAGCTCGTCGCG 532095 Query 870 ACTACGAAACCCTCCTTGAAGCCTCG 895 | ||||| |||||||||| || ||| Sbjct 532094 ATTACGAGTCCCTCCTTGAGGCATCG 532069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945552910650