Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28] 1,723 sequences; 31,087,040 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1624 286 1e-73 >seq1624 Length=48625 Score = 286 bits (316), Expect = 1e-73 Identities = 631/926 (68%), Gaps = 49/926 (5%) Strand=Plus/Plus Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68 ||| | || || || ||||| |||| |||||||| ||||||||||| ||||| ||| Sbjct 47184 AAGTCTAAAATTCTGGAGCGCATGGAAGAATGGACTGAGATGTTCGCATCCAACCCGGAT 47243 Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGT--GATCAAC 126 ||||||||||||| ||||| || |||| | || ||| ||| || | | || || Sbjct 47244 TTTGGCATCATGGAACAGGCATACATGAAATTAAAAACAACGAGTAAGTATCTGTTCTAC 47303 Query 127 TCTGGTTCGT-TGGGAGCACTGAC-CAACGTGTTGTAGACCCTAACCTGCGACCTCCGTC 184 || || | | | || | ||| || | || ||||||| || |||| || ||||| Sbjct 47304 -CTCGTGAATATCCGGGCTC-GACTCATAATATTCTAGACCCGAATCTGCAGCCACCGTC 47361 Query 185 GAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTACA 244 ||||||| ||| ||||||| || || || |||| |||||| ||||| | || Sbjct 47362 GAAACCTGGAAAGCGTGAGATCACCGATGTTGATCGTCAGATGGAAGAAGAGGAATTGCA 47421 Query 245 GATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACC---GAGCCATCCGCCGC--CAGG 299 |||||| || || || || | ||||| | | ||| | | | | ||||| ||| Sbjct 47422 GATGGCCCTAGCCCTGTCTATTAAGGATAAAGCAACCCCGGCGGCTGCTGCCGCGGCAGC 47481 Query 300 TCCAACCAGCCGCAAGCAAAAGCCCCA-------CAACA--ATCCGC-CCCGGAA--CAA 347 || | |||| || || | | || | ||| || ||| || ||| Sbjct 47482 ACCT-CGAGCC-CAGGCTTCGTCTGCTGCTGTTGCATCGGCATCGGCTCCCACAAATCAA 47539 Query 348 GAGCAGCA---------TCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGC 398 ||| ||| |||| || | || || || ||| ||||||||| || ||| Sbjct 47540 GAGGAGCCCACCGAGACTCAACCTGCTCTCTCAGGTACATCAGTAGCTACCGTGTCGCGC 47599 Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458 || | || | | ||||||| || || || || || ||| | |||||||||||| Sbjct 47600 GTGAGAGCATTGTTCGACTTCCAACCGTCTGAGCCAGGAGAGCTTCAATTCCGCAAAGGC 47659 Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518 || | |||||| ||||| |||||||| |||||||| ||||||||||| || ||| | ||| Sbjct 47660 GATACTATTGCAGTTCTGGAGTCTGTCTACAAGGATTGGTGGAAGGGCTCCCTGAGAGGA 47719 Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578 || |||||||| ||||| ||||||||||| ||||| || | ||||| || || ||| Sbjct 47720 CAAACCGGCATTTTCCCTCTCAACTATGTGGAGAAACTCCCAGATCCCACTGTCGATGAG 47779 Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 || || | || ||||| ||||| ||||| ||||||| | ||||||||| || |||||| Sbjct 47780 CTGCAGCGGGAGGCTCAAATGGAAGCGGACGTCTTTGGGCAGATCAAGAGTGTCGAGAAG 47839 Query 639 CTGCTAGCTCTGCTGAGCACTAGT--TCGAGTGC-CGACGCTAGGGACAATGAGGAGATC 695 || || |||| |||||||| || | || | | | | | || || || ||||| Sbjct 47840 CTTCTGACTCTACTGAGCACCCGTAATACAGACCTCAATGTTCAAGAAAACGAAGAGATT 47899 Query 696 ACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAG 755 ||| | || || || || | |||| || || ||| | ||||| | ||||| || Sbjct 47900 ACTACACTCTATCAAGCTACGCTTGCGATTCGTCCAAAGCTCATCGAATTGATTGGGAAA 47959 Query 756 TATTCGCAAAAGAAGGGTAAGTGG--AATC---TTTTACGCGAATTTGTGTGTTGGCCAC 810 |||||||| ||||| |||||| | | || | || || | || |||| | | Sbjct 47960 TATTCGCAGAAGAAAGGTAAGCAGCCACTCGTTTGTTTTGCCA---TGGATGTT--TCGC 48014 Query 811 TGA-TCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCG 869 | | | || || |||||| ||||| |||||||| || ||||||||||| || || |||| Sbjct 48015 TTACACATG-TCTAGATGAATTCACCCAGCTCAATGAAAAGTTCATCAAAGCTCGTCGCG 48073 Query 870 ACTACGAAACCCTCCTTGAAGCCTCG 895 | ||||| |||||||||| || ||| Sbjct 48074 ATTACGAGTCCCTCCTTGAGGCATCG 48099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945299500185