Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20expansum_20[genbank_20GCA_5F000769755.1_202014-10-28]
1,723 sequences; 31,087,040 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1624 286 1e-73
>seq1624
Length=48625
Score = 286 bits (316), Expect = 1e-73
Identities = 631/926 (68%), Gaps = 49/926 (5%)
Strand=Plus/Plus
Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68
||| | || || || ||||| |||| |||||||| ||||||||||| ||||| |||
Sbjct 47184 AAGTCTAAAATTCTGGAGCGCATGGAAGAATGGACTGAGATGTTCGCATCCAACCCGGAT 47243
Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGT--GATCAAC 126
||||||||||||| ||||| || |||| | || ||| ||| || | | || ||
Sbjct 47244 TTTGGCATCATGGAACAGGCATACATGAAATTAAAAACAACGAGTAAGTATCTGTTCTAC 47303
Query 127 TCTGGTTCGT-TGGGAGCACTGAC-CAACGTGTTGTAGACCCTAACCTGCGACCTCCGTC 184
|| || | | | || | ||| || | || ||||||| || |||| || |||||
Sbjct 47304 -CTCGTGAATATCCGGGCTC-GACTCATAATATTCTAGACCCGAATCTGCAGCCACCGTC 47361
Query 185 GAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTACA 244
||||||| ||| ||||||| || || || |||| |||||| ||||| | ||
Sbjct 47362 GAAACCTGGAAAGCGTGAGATCACCGATGTTGATCGTCAGATGGAAGAAGAGGAATTGCA 47421
Query 245 GATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACC---GAGCCATCCGCCGC--CAGG 299
|||||| || || || || | ||||| | | ||| | | | | ||||| |||
Sbjct 47422 GATGGCCCTAGCCCTGTCTATTAAGGATAAAGCAACCCCGGCGGCTGCTGCCGCGGCAGC 47481
Query 300 TCCAACCAGCCGCAAGCAAAAGCCCCA-------CAACA--ATCCGC-CCCGGAA--CAA 347
|| | |||| || || | | || | ||| || ||| || |||
Sbjct 47482 ACCT-CGAGCC-CAGGCTTCGTCTGCTGCTGTTGCATCGGCATCGGCTCCCACAAATCAA 47539
Query 348 GAGCAGCA---------TCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGC 398
||| ||| |||| || | || || || ||| ||||||||| || |||
Sbjct 47540 GAGGAGCCCACCGAGACTCAACCTGCTCTCTCAGGTACATCAGTAGCTACCGTGTCGCGC 47599
Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458
|| | || | | ||||||| || || || || || ||| | ||||||||||||
Sbjct 47600 GTGAGAGCATTGTTCGACTTCCAACCGTCTGAGCCAGGAGAGCTTCAATTCCGCAAAGGC 47659
Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518
|| | |||||| ||||| |||||||| |||||||| ||||||||||| || ||| | |||
Sbjct 47660 GATACTATTGCAGTTCTGGAGTCTGTCTACAAGGATTGGTGGAAGGGCTCCCTGAGAGGA 47719
Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578
|| |||||||| ||||| ||||||||||| ||||| || | ||||| || || |||
Sbjct 47720 CAAACCGGCATTTTCCCTCTCAACTATGTGGAGAAACTCCCAGATCCCACTGTCGATGAG 47779
Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638
|| || | || ||||| ||||| ||||| ||||||| | ||||||||| || ||||||
Sbjct 47780 CTGCAGCGGGAGGCTCAAATGGAAGCGGACGTCTTTGGGCAGATCAAGAGTGTCGAGAAG 47839
Query 639 CTGCTAGCTCTGCTGAGCACTAGT--TCGAGTGC-CGACGCTAGGGACAATGAGGAGATC 695
|| || |||| |||||||| || | || | | | | | || || || |||||
Sbjct 47840 CTTCTGACTCTACTGAGCACCCGTAATACAGACCTCAATGTTCAAGAAAACGAAGAGATT 47899
Query 696 ACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAG 755
||| | || || || || | |||| || || ||| | ||||| | ||||| ||
Sbjct 47900 ACTACACTCTATCAAGCTACGCTTGCGATTCGTCCAAAGCTCATCGAATTGATTGGGAAA 47959
Query 756 TATTCGCAAAAGAAGGGTAAGTGG--AATC---TTTTACGCGAATTTGTGTGTTGGCCAC 810
|||||||| ||||| |||||| | | || | || || | || |||| | |
Sbjct 47960 TATTCGCAGAAGAAAGGTAAGCAGCCACTCGTTTGTTTTGCCA---TGGATGTT--TCGC 48014
Query 811 TGA-TCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCG 869
| | | || || |||||| ||||| |||||||| || ||||||||||| || || ||||
Sbjct 48015 TTACACATG-TCTAGATGAATTCACCCAGCTCAATGAAAAGTTCATCAAAGCTCGTCGCG 48073
Query 870 ACTACGAAACCCTCCTTGAAGCCTCG 895
| ||||| |||||||||| || |||
Sbjct 48074 ATTACGAGTCCCTCCTTGAGGCATCG 48099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945299500185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |