Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20expansum_20[genbank_20GCA_5F001750045.2_202016-12-07] 257 sequences; 35,046,070 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq37 286 1e-73 >seq37 Length=243779 Score = 286 bits (316), Expect = 1e-73 Identities = 631/926 (68%), Gaps = 49/926 (5%) Strand=Plus/Minus Query 9 AAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTGAT 68 ||| | || || || ||||| |||| |||||||| ||||||||||| ||||| ||| Sbjct 58706 AAGTCTAAAATTCTGGAGCGCATGGAAGAATGGACTGAGATGTTCGCATCCAACCCGGAT 58647 Query 69 CTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGT--GATCAAC 126 ||||||||||||| ||||| || |||| | || ||| ||| || | | || || Sbjct 58646 TTTGGCATCATGGAACAGGCATACATGAAATTAAAAACAACGAGTAAGTATCTGTTCTAC 58587 Query 127 TCTGGTTCGT-TGGGAGCACTGAC-CAACGTGTTGTAGACCCTAACCTGCGACCTCCGTC 184 || || | | | || | ||| || | || ||||||| || |||| || ||||| Sbjct 58586 -CTCGTGAATATCCGGGCTC-GACTCATAATATTCTAGACCCGAATCTGCAGCCACCGTC 58529 Query 185 GAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTACA 244 ||||||| ||| ||||||| || || || |||| |||||| ||||| | || Sbjct 58528 GAAACCTGGAAAGCGTGAGATCACCGATGTTGATCGTCAGATGGAAGAAGAGGAATTGCA 58469 Query 245 GATGGCGCTGGCACTCTCCGTCAAGGAAAGCGGGACC---GAGCCATCCGCCGC--CAGG 299 |||||| || || || || | ||||| | | ||| | | | | ||||| ||| Sbjct 58468 GATGGCCCTAGCCCTGTCTATTAAGGATAAAGCAACCCCGGCGGCTGCTGCCGCGGCAGC 58409 Query 300 TCCAACCAGCCGCAAGCAAAAGCCCCA-------CAACA--ATCCGC-CCCGGAA--CAA 347 || | |||| || || | | || | ||| || ||| || ||| Sbjct 58408 ACCT-CGAGCC-CAGGCTTCGTCTGCTGCTGTTGCATCGGCATCGGCTCCCACAAATCAA 58351 Query 348 GAGCAGCA---------TCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGC 398 ||| ||| |||| || | || || || ||| ||||||||| || ||| Sbjct 58350 GAGGAGCCCACCGAGACTCAACCTGCTCTCTCAGGTACATCAGTAGCTACCGTGTCGCGC 58291 Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458 || | || | | ||||||| || || || || || ||| | |||||||||||| Sbjct 58290 GTGAGAGCATTGTTCGACTTCCAACCGTCTGAGCCAGGAGAGCTTCAATTCCGCAAAGGC 58231 Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518 || | |||||| ||||| |||||||| |||||||| ||||||||||| || ||| | ||| Sbjct 58230 GATACTATTGCAGTTCTGGAGTCTGTCTACAAGGATTGGTGGAAGGGCTCCCTGAGAGGA 58171 Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578 || |||||||| ||||| ||||||||||| ||||| || | ||||| || || ||| Sbjct 58170 CAAACCGGCATTTTCCCTCTCAACTATGTGGAGAAACTCCCAGATCCCACTGTCGATGAG 58111 Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 || || | || ||||| ||||| ||||| ||||||| | ||||||||| || |||||| Sbjct 58110 CTGCAGCGGGAGGCTCAAATGGAAGCGGACGTCTTTGGGCAGATCAAGAGTGTCGAGAAG 58051 Query 639 CTGCTAGCTCTGCTGAGCACTAGT--TCGAGTGC-CGACGCTAGGGACAATGAGGAGATC 695 || || |||| |||||||| || | || | | | | | || || || ||||| Sbjct 58050 CTTCTGACTCTACTGAGCACCCGTAATACAGACCTCAATGTTCAAGAAAACGAAGAGATT 57991 Query 696 ACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAG 755 ||| | || || || || | |||| || || ||| | ||||| | ||||| || Sbjct 57990 ACTACACTCTATCAAGCTACGCTTGCGATTCGTCCAAAGCTCATCGAATTGATTGGGAAA 57931 Query 756 TATTCGCAAAAGAAGGGTAAGTGG--AATC---TTTTACGCGAATTTGTGTGTTGGCCAC 810 |||||||| ||||| |||||| | | || | || || | || |||| | | Sbjct 57930 TATTCGCAGAAGAAAGGTAAGCAGCCACTCGTTTGTTTTGCCA---TGGATGTT--TCGC 57876 Query 811 TGA-TCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCG 869 | | | || || |||||| ||||| |||||||| || ||||||||||| || || |||| Sbjct 57875 TTACACATG-TCTAGATGAATTCACCCAGCTCAATGAAAAGTTCATCAAAGCTCGTCGCG 57817 Query 870 ACTACGAAACCCTCCTTGAAGCCTCG 895 | ||||| |||||||||| || ||| Sbjct 57816 ATTACGAGTCCCTCCTTGAGGCATCG 57791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945555177915