Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20freii_20[genbank_20GCA_5F001513925.1_202016-01-13] 1,923 sequences; 33,546,389 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1200 219 1e-53 >seq1200 Length=30480 Score = 219 bits (242), Expect = 1e-53 Identities = 387/560 (69%), Gaps = 23/560 (4%) Strand=Plus/Plus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || ||| | | ||||||||| || || || | || | | ||||||| || || Sbjct 14463 TCAGGTACCTCGGTAGCTACCGTGTCGCGTGTGAGAGCGTTGTTCGACTTCCAACCGTCT 14522 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || || || ||| | |||||||||||||| | ||||| || | |||||||| ||| Sbjct 14523 GAGCCAGGAGAGCTTCAATTCCGCAAAGGCGATACCATTGCAGTCTTGGAGTCTGTTTAC 14582 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 ||||| ||||||||||| || ||| | || ||||| || |||||||| || || ||||| Sbjct 14583 AAGGATTGGTGGAAGGGCTCCCTGAGAGGCCAGACTGGAATCTTCCCTCTTAATTATGTG 14642 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||| || | || || || | ||||| || |||| ||||||||||| ||||| Sbjct 14643 GAGAAACTCCCAGACCCCACAGTCGGTGAGCTGCAGCGAGAGGCTCAGATGGAAGCGGAC 14702 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668 ||||||| ||||||||| || ||||| || || |||| |||||||| | | | Sbjct 14703 GTCTTTGGCCAGATCAAGAGTGTCGAGAAACTCCTGACTCTACTGAGCACCCG---CAAT 14759 Query 669 GCCGA-CGCTAGG-----GACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCG 722 | || | | | | || || || ||||| ||| | || || || || | || Sbjct 14760 ACAGACCTCAATGTCCAAGAAAACGAAGAGATTACTACACTCTATCAAGCTACGCTTGCG 14819 Query 723 ATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG--TGGA 780 || || || || | ||||| | ||||| || |||||||||||||| |||||| || Sbjct 14820 ATTCGTCCAAAACTCATCGAATTGATTGGGAAATATTCGCAAAAGAAAGGTAAGCAGCGA 14879 Query 781 ATC-----TTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACG 835 || |||| || || ||| ||| || || || |||||| ||||| Sbjct 14880 GTCGTTCGTTTTCCG---ATGGATGTCTTGCTTACACCTC----TCTAGATGAATTCACC 14932 Query 836 CAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCG 895 |||||||| || |||||||| || || || || ||||| || |||||||||| || ||| Sbjct 14933 CAGCTCAATGAAAAGTTCATTAAAGCTCGTCGTGACTATGAGTCCCTCCTTGAGGCATCG 14992 Query 896 ATGTCGCAACCAGCGCAGCC 915 | | || || || ||||| Sbjct 14993 CTAGCCCACCCGGCACAGCC 15012 Score = 91.5 bits (100), Expect = 5e-15 Identities = 187/273 (68%), Gaps = 15/273 (5%) Strand=Plus/Plus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | |||||||| ||||| |||| |||||||| ||||||||||| ||||| | Sbjct 14073 TCAAGTCCAAGATCCTGGAGCGCATGGAAGAATGGACTGAGATGTTCGCATCCAACCCGG 14132 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGT--GCGTGTGATCA 124 || ||||||||||||| ||||| || |||| | || | |||| | | || || Sbjct 14133 ATTTTGGCATCATGGAACAGGCATACATGAAATTAAAATCGACAAGTAAGTATCTGTTCT 14192 Query 125 AC-TCTGG---TTCGT--TGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACC 178 || ||| | |||| | || |||| | | || ||||||| || ||| || Sbjct 14193 ACGTCTTGAATATCGTGCTTGG----CTGATTA---TATTATAGACCCGAATTTGCAGCC 14245 Query 179 TCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGA 238 ||||||||||| ||| ||||||| || || || |||| ||| || ||||| Sbjct 14246 ACCGTCGAAACCCGGAAAGCGTGAGATCACCGATGTTGATCGTCAGATGGAGGAAGAGGA 14305 Query 239 GCTACAGATGGCGCTGGCACTCTCCGTCAAGGA 271 | || ||||| || || ||||| | ||||| Sbjct 14306 ATTGCAAATGGCCCTAGCCCTCTCGATTAAGGA 14338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945264619185