Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1160 235 2e-58 >seq1160 Length=141617 Score = 235 bits (260), Expect = 2e-58 Identities = 381/543 (70%), Gaps = 10/543 (2%) Strand=Plus/Plus Query 379 CAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCG 438 ||| ||||||||| || || || | || | | ||||||| || || || || || | Sbjct 20017 CAGTAGCTACCGTGTCGCGTGTGAGAGCGTTATTCGACTTCCAACCGTCTGAGCCAGGAG 20076 Query 439 AGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGT 498 || | |||||||||||||| | ||||| ||||| |||||||| |||||||| |||| Sbjct 20077 AGCTTCAATTCCGCAAAGGCGATACCATTGCAGTTCTGGAGTCTGTCTACAAGGATTGGT 20136 Query 499 GGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGC 558 ||||||| || ||| | || ||||||||||| ||||| ||||||||||| || || || | Sbjct 20137 GGAAGGGCTCCCTGAGAGGCCAGACCGGCATTTTCCCTCTCAACTATGTGGAAAAACTCC 20196 Query 559 AGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGG 618 || || || || ||||| || | |||||||| ||||| ||||| ||||||| Sbjct 20197 CAGACCCCACTGTTGATGAGCTGCAGCGGGAAGCTCAAATGGAAGCGGACGTCTTTGGCC 20256 Query 619 AGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAG--TTCGAGTGC-CGACG 675 ||||||||| || |||||||| || |||| |||||||| | | || | | | | Sbjct 20257 AGATCAAGAGTGTTGAGAAGCTTCTGACTCTACTGAGCACCCGCAATACAGACCTCAATG 20316 Query 676 CTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGT 735 | || || || ||||| || | || ||||| || | |||| || || || Sbjct 20317 TTCAAGAAAACGAAGAGATTACCACACTCTACCAAGCCACGCTTGCGATTCGTCCAAAAC 20376 Query 736 TGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGG--AATCTTTTACGCG- 792 | || || | ||||| || || ||||||||||| ||||| | || | ||| | Sbjct 20377 TCATTGAATTGATTGGGAAATACTCGCAAAAGAAAGGTAACCAGCCAACCATTTGTTTGC 20436 Query 793 AATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTT 852 || || | | ||| || || |||||| ||||| |||||||| || ||||| Sbjct 20437 CATAGATGCCTCGCTCACACAT----GTCTAGATGAATTCACCCAGCTCAATGAAAAGTT 20492 Query 853 CATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCA 912 |||||| || || |||||||| || |||||||||| || ||| | | || || || || Sbjct 20493 CATCAAAGCTCGTCGCGACTATGAGTCCCTCCTTGAGGCATCGCTAGCCCACCCGGCACA 20552 Query 913 GCC 915 ||| Sbjct 20553 GCC 20555 Score = 80.6 bits (88), Expect = 8e-12 Identities = 183/270 (68%), Gaps = 9/270 (3%) Strand=Plus/Plus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 |||| | ||||| || ||||| |||| |||||||| ||||||||||| ||||| | Sbjct 19620 TCAAATCTAAGATTCTGGAGCGCATGGAAGAATGGACTGAGATGTTCGCATCCAACCCGG 19679 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAG--TGCGTGTGATCA 124 || | ||||||||||| ||||| || |||| || || ||| || ||| | || || Sbjct 19680 ATTTCGGCATCATGGAACAGGCATACATGAAACTAAAAACAACGAGTATGCATCTGTTCT 19739 Query 125 A--CTCTGGTTCGTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCCG 182 | | || | || ||||| | | || |||||| || ||| || ||| Sbjct 19740 AGGTTGTGAATATCGGGCTTGACTGATTA---TATTCCAGACCCGAATTTGCAGCCACCG 19796 Query 183 TCGAAACCTCAGAAGAC-CCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCT 241 ||||||||| ||| || |||| || || || || || | ||| || ||||| | Sbjct 19797 TCGAAACCT-GGAAAACGTGAGATAACCGATGTTGATCGTCAAATGGAGGAAGAGGAATT 19855 Query 242 ACAGATGGCGCTGGCACTCTCCGTCAAGGA 271 |||||||| || || ||||| | ||||| Sbjct 19856 GCAGATGGCCCTAGCCCTCTCGATTAAGGA 19885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945393155670