Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F002116305.1_202017-05-01] 358 sequences; 31,026,583 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq245 226 9e-56 >seq245 Length=172227 Score = 226 bits (250), Expect = 9e-56 Identities = 379/543 (70%), Gaps = 10/543 (2%) Strand=Plus/Minus Query 379 CAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCG 438 ||| ||||||||| || || || | || | | ||||||| || || || || || | Sbjct 62070 CAGTAGCTACCGTGTCGCGTGTGAGAGCGTTATTCGACTTCCAACCGTCTGAGCCAGGAG 62011 Query 439 AGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGT 498 || | |||||||||||||| | ||||| ||||| ||||| || |||||||| |||| Sbjct 62010 AGCTTCAATTCCGCAAAGGCGATACCATTGCAGTTCTGGAGTCCGTCTACAAGGATTGGT 61951 Query 499 GGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGC 558 ||||||| || ||| | || ||||||||||| ||||| ||||||||||| || || || | Sbjct 61950 GGAAGGGCTCCCTGAGAGGCCAGACCGGCATTTTCCCTCTCAACTATGTGGAAAAACTCC 61891 Query 559 AGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGG 618 || || || || ||||| || | || ||||| ||||| ||||| ||||||| Sbjct 61890 CAGACCCCACTGTTGATGAGCTGCAGCGGGAGGCTCAAATGGAAGCGGACGTCTTTGGCC 61831 Query 619 AGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAG--TTCGAGTGC-CGACG 675 ||||||||| || |||||||| || |||| |||||||| | | || | | | | Sbjct 61830 AGATCAAGAGTGTTGAGAAGCTTCTGACTCTACTGAGCACCCGCAATACAGACCTCAATG 61771 Query 676 CTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGT 735 | || || || ||||| || | || ||||| || | |||| || || || Sbjct 61770 TTCAAGAAAACGAAGAGATTACCACACTCTACCAAGCTACGCTTGCGATTCGTCCAAAAC 61711 Query 736 TGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGG--AATCTTTTACGCG- 792 | || || | ||||| || || ||||||||||| ||||| | || | ||| | Sbjct 61710 TCATTGAATTGATTGGGAAATACTCGCAAAAGAAAGGTAAACAGCCAACCATTTGTTTGC 61651 Query 793 AATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTT 852 || || | | ||| || || |||||| ||||| |||||||| || ||||| Sbjct 61650 CATAGATGCCTCGCTCACACAT----GTCTAGATGAATTCACCCAGCTCAATGAAAAGTT 61595 Query 853 CATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCA 912 |||||| || || |||||||| || |||||||||| || ||| | | || || || || Sbjct 61594 CATCAAAGCTCGTCGCGACTATGAGTCCCTCCTTGAGGCATCGCTAGCCCACCCGGCACA 61535 Query 913 GCC 915 ||| Sbjct 61534 GCC 61532 Score = 86.0 bits (94), Expect = 2e-13 Identities = 182/269 (68%), Gaps = 7/269 (3%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 |||| | ||||| || ||||| |||| |||||||| ||||||||||| ||||| | Sbjct 62467 TCAAATCTAAGATTCTGGAGCGCATGGAAGAATGGACTGAGATGTTCGCATCCAACCCGG 62408 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAG--TGCGTGTGATCA 124 || | ||||||||||| ||||| || |||| || || ||| || ||| | || || Sbjct 62407 ATTTCGGCATCATGGAACAGGCATACATGAAACTAAAAACAACGAGTATGCATCTGTTCT 62348 Query 125 A--CTCTGGTTCGTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCCG 182 | | || | || ||||| | | || |||||| || ||| || ||| Sbjct 62347 AGGTTGTGAATATCGGGCTTGACTGATTA---TATTCCAGACCCGAATTTGCAGCCACCG 62291 Query 183 TCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTA 242 ||||||||| ||| |||| || || || || || | |||||| ||||| | Sbjct 62290 TCGAAACCTGGAAAGCGTGAGATAACCGATGTTGATCGTCAAATGGAAGAAGAGGAATTG 62231 Query 243 CAGATGGCGCTGGCACTCTCCGTCAAGGA 271 |||||||| || || ||||| | ||||| Sbjct 62230 CAGATGGCCCTAGCCCTCTCGATTAAGGA 62202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945537563010