Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1 224 3e-55 >seq1 Length=5008156 Score = 224 bits (248), Expect = 3e-55 Identities = 378/543 (70%), Gaps = 17/543 (3%) Strand=Plus/Minus Query 383 AGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTT 442 ||||||||| || || || | || | | ||||||| || || || || || ||| | Sbjct 3209079 AGCTACCGTGTCGCGTGTGAGAGCGTTGTTCGACTTCCAACCGTCTGAGCCAGGAGAGCT 3209020 Query 443 GGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAA 502 |||||||||||||| | ||||| || || ||||| || |||||||| |||||||| Sbjct 3209019 TCAATTCCGCAAAGGCGATACCATTGCAGTCCTGGAGTCAGTTTACAAGGATTGGTGGAA 3208960 Query 503 GGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGA 562 ||| || ||| | || ||||| || || ||||| || || ||||| ||||| || | || Sbjct 3208959 GGGCTCCCTGAGAGGCCAGACTGGAATTTTCCCTCTTAATTATGTAGAGAAACTCCCAGA 3208900 Query 563 TCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGAT 622 || || | ||||| || |||| ||||||||||||||||| ||||||| |||| Sbjct 3208899 CCCCACAGTCGGCGAGCTGCAGCGAGAGGCTCAGATGGAGGCGGACGTCTTTGGCCAGAT 3208840 Query 623 CAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCGA-CGCTAGG- 680 ||||| || ||||| || || |||| |||||||| | | | | || | | | | Sbjct 3208839 CAAGAGTGTCGAGAAACTCCTGACTCTACTGAGCACCCG---CAATACAGACCTCAATGT 3208783 Query 681 ----GACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTT 736 || || || ||||| ||| | || || || || | |||| || || || | Sbjct 3208782 CCAAGAAAACGAAGAGATTACTACACTCTATCAAGCTACGCTTGCGATTCGTCCAAAACT 3208723 Query 737 GATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG--TGGAATCTTT--TACGCG 792 ||||| | ||||| || |||||||||||||| |||||| ||| || || | | Sbjct 3208722 CATCGAATTGATTGGGAAATATTCGCAAAAGAAAGGTAAGCAGGGAGTCGTTCATTTTCC 3208663 Query 793 AATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTT 852 || | || ||| || || ||| |||||| ||||| |||||||| || ||||| Sbjct 3208662 TATGGGGGTCTTGCTTACACAT----TTCTAGATGAATTCACCCAGCTCAATGAAAAGTT 3208607 Query 853 CATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCA 912 ||| || || || || ||||| || |||||||||| || ||| | | || || || || Sbjct 3208606 CATTAAAGCTCGTCGTGACTATGAGTCCCTCCTTGAGGCATCGCTAGCCCACCCGGCACA 3208547 Query 913 GCC 915 ||| Sbjct 3208546 GCC 3208544 Score = 95.1 bits (104), Expect = 4e-16 Identities = 190/274 (69%), Gaps = 17/274 (6%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | |||||||| ||||| |||| |||||||| ||||||||||| ||||| | Sbjct 3209483 TCAAGTCCAAGATCCTGGAGCGCATGGAAGAATGGACTGAGATGTTCGCATCCAACCCGG 3209424 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACA-AAGT--GCGTGTGATC 123 || ||||||||||||| ||||| || |||| |||| | || |||| | | || || Sbjct 3209423 ATTTTGGCATCATGGAACAGGCATACATGA-AATTAAAATCCACAAGTAAGTATCTGTTC 3209365 Query 124 AAC-TCTGG---TTCGT--TGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGAC 177 || | | | |||| | || |||| | | || ||||||| || ||| | Sbjct 3209364 TACGTGTTGAACATCGTGCTTGG----CTGATTA---TATTATAGACCCGAATTTGCAGC 3209312 Query 178 CTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGG 237 | ||||||||||| ||| ||||||| || || || |||| ||| || |||| Sbjct 3209311 CACCGTCGAAACCCGGAAAGCGTGAGATCACCGATGTTGATCGTCAGATGGAGGAAGAGG 3209252 Query 238 AGCTACAGATGGCGCTGGCACTCTCCGTCAAGGA 271 | | |||||||| || || ||||| | ||||| Sbjct 3209251 AATTGCAGATGGCCCTAGCCCTCTCGATTAAGGA 3209218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945586919625