Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq63 260 4e-66 >seq63 Length=154750 Score = 260 bits (288), Expect = 4e-66 Identities = 635/946 (67%), Gaps = 47/946 (5%) Strand=Plus/Plus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | ||||| || ||||| |||| |||||||| ||||||||| | ||||| | Sbjct 94710 TCAAGTCTAAGATTCTAGAGCGCATGGAAGAATGGACTGAGATGTTCTCATCCAACCCGG 94769 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGAT-CAA 125 || ||||||||||||| ||||| || |||| | || || |||| || | | | | Sbjct 94770 ATTTTGGCATCATGGAACAGGCATACATGAAATTAAAAACCACAAGTAAGTATCTTTCTA 94829 Query 126 C-TCTGGTTCGTTGGGAGC-ACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCCGT 183 | || | | || || ||||| | | || |||||| || |||| || |||| Sbjct 94830 CGTCCTATACTCCGGACGCGACTGATTA---TATTACAGACCCGAATCTGCAGCCACCGT 94886 Query 184 CGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTAC 243 |||||||| ||| ||||||| ||| || || |||| ||| |||||||| | | Sbjct 94887 CGAAACCTGGAAAGCGTGAGATCACCGACGTCGATCGTCAGATGGAGGAGGAGGAATTGC 94946 Query 244 AGATGGCGCTGGCACTCTCCGTCAAGGA--AAGCGGGACCGA--GC--CATCCGCCGC-- 295 ||||||| |||| ||||| | ||||| |||| |||| || | || || || Sbjct 94947 AGATGGCTTTGGCCCTCTCGATTAAGGATAAAGCAACACCGGCGGCTGCTTCTGCGGCAG 95006 Query 296 CAGGTCCAAC-----------CAGCCGCAA--GCAAAAGCCCCA----CAACAATCCGCC 338 || || | | | || || ||| || || | |||| || Sbjct 95007 CACCTCGAGCTGAGGCTCCTTCTGCTGCTGTTGCATCGGCATCAGCTGCCACAACCCAAG 95066 Query 339 CCGGAACAAGAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGC 398 ||| | | || |||| || | || || || | | ||| ||||| || || Sbjct 95067 G-GGAGCCCGCCGAGACTCAACCTGCTCTCTCAGGCACATCGGTAGCGACCGTGTCGCGT 95125 Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458 || | || || | ||||||| || || || || || ||| | |||||||| ||| Sbjct 95126 GTGAGAGCGCTGTTCGACTTCCAACCGTCCGAGCCAGGAGAGCTTCAATTCCGCAAGGGC 95185 Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518 || | ||||| || || |||||||| |||||||| |||||||||||||||||| | || Sbjct 95186 GATACCATTGCAGTCCTGGAGTCTGTTTACAAGGATTGGTGGAAGGGTTCTCTGAGAGGC 95245 Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578 |||||||| || ||||| ||||||||||| ||||| || | || || || || ||| Sbjct 95246 CAGACCGGAATTTTCCCTCTCAACTATGTGGAGAAACTCCCAGACCCCACTGTCGATGAG 95305 Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638 | || | || ||||| ||||||||||| ||||||| ||||||||| || |||||| Sbjct 95306 TTGCAGCGGGAGGCTCAAATGGAGGCGGACGTCTTTGGCCAGATCAAGAGTGTTGAGAAG 95365 Query 639 CTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCGA-CGCTAGG-----GACAATGAGGAG 692 || || |||| || ||||| | | | | || | | | | || || || ||| Sbjct 95366 CTCCTGACTCTACTAAGCACCCG---CAATACAGATCTCAATGTCCAAGAGAACGAAGAG 95422 Query 693 ATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGC 752 || ||| | || || || || | | || ||||| || | ||||| | ||||| Sbjct 95423 ATTACTACACTCTATCAAGCTACGCTTGCCATTCGGCCAAAACTCATCGAATTGATTGGA 95482 Query 753 AAGTATTCGCAAAAGAAGGGTAAGTGG--AATCTTTTACGCGAATTTGTGTGTTGGCCAC 810 || |||||||||||||| ||||| | | || ||| | | ||| || | | Sbjct 95483 AAATATTCGCAAAAGAAAGGTAATCAGCCAGTCGTTT--GTTACACCGTGGATTTCCGGC 95540 Query 811 TGATCGTGT-TCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCG 869 | | ||||| | |||||| ||||| |||||||| || |||||||||||||| || |||| Sbjct 95541 TTA-CGTGTGTTTAGATGAATTCACCCAGCTCAATGAAAAGTTCATCAAGGCTCGTCGCG 95599 Query 870 ACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 |||| || |||||||||| || ||| | | || || |||||||| Sbjct 95600 ACTATGAGTCCCTCCTTGAGGCATCGCTAGCCCATCCGGCGCAGCC 95645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945525354660