Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001599855.1_202016-03-
01] 16 sequences; 27,123,058 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq3 260 4e-66
>seq3
Length=5002383
Score = 260 bits (288), Expect = 4e-66
Identities = 635/946 (67%), Gaps = 47/946 (5%)
Strand=Plus/Plus
Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66
||||| | ||||| || ||||| |||| |||||||| ||||||||| | ||||| |
Sbjct 1001617 TCAAGTCTAAGATTCTAGAGCGCATGGAAGAATGGACTGAGATGTTCTCATCCAACCCGG 1001676
Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGAT-CAA 125
|| ||||||||||||| ||||| || |||| | || || |||| || | | | |
Sbjct 1001677 ATTTTGGCATCATGGAACAGGCATACATGAAATTAAAAACCACAAGTAAGTATCTTTCTA 1001736
Query 126 C-TCTGGTTCGTTGGGAGC-ACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCCGT 183
| || | | || || ||||| | | || |||||| || |||| || ||||
Sbjct 1001737 CGTCCTATACTCCGGACGCGACTGATTA---TATTACAGACCCGAATCTGCAGCCACCGT 1001793
Query 184 CGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTAC 243
|||||||| ||| ||||||| ||| || || |||| ||| |||||||| | |
Sbjct 1001794 CGAAACCTGGAAAGCGTGAGATCACCGACGTCGATCGTCAGATGGAGGAGGAGGAATTGC 1001853
Query 244 AGATGGCGCTGGCACTCTCCGTCAAGGA--AAGCGGGACCGA--GC--CATCCGCCGC-- 295
||||||| |||| ||||| | ||||| |||| |||| || | || || ||
Sbjct 1001854 AGATGGCTTTGGCCCTCTCGATTAAGGATAAAGCAACACCGGCGGCTGCTTCTGCGGCAG 1001913
Query 296 CAGGTCCAAC-----------CAGCCGCAA--GCAAAAGCCCCA----CAACAATCCGCC 338
|| || | | | || || ||| || || | |||| ||
Sbjct 1001914 CACCTCGAGCTGAGGCTCCTTCTGCTGCTGTTGCATCGGCATCAGCTGCCACAACCCAAG 1001973
Query 339 CCGGAACAAGAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGC 398
||| | | || |||| || | || || || | | ||| ||||| || ||
Sbjct 1001974 G-GGAGCCCGCCGAGACTCAACCTGCTCTCTCAGGCACATCGGTAGCGACCGTGTCGCGT 1002032
Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458
|| | || || | ||||||| || || || || || ||| | |||||||| |||
Sbjct 1002033 GTGAGAGCGCTGTTCGACTTCCAACCGTCCGAGCCAGGAGAGCTTCAATTCCGCAAGGGC 1002092
Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518
|| | ||||| || || |||||||| |||||||| |||||||||||||||||| | ||
Sbjct 1002093 GATACCATTGCAGTCCTGGAGTCTGTTTACAAGGATTGGTGGAAGGGTTCTCTGAGAGGC 1002152
Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578
|||||||| || ||||| ||||||||||| ||||| || | || || || || |||
Sbjct 1002153 CAGACCGGAATTTTCCCTCTCAACTATGTGGAGAAACTCCCAGACCCCACTGTCGATGAG 1002212
Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638
| || | || ||||| ||||||||||| ||||||| ||||||||| || ||||||
Sbjct 1002213 TTGCAGCGGGAGGCTCAAATGGAGGCGGACGTCTTTGGCCAGATCAAGAGTGTTGAGAAG 1002272
Query 639 CTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCGA-CGCTAGG-----GACAATGAGGAG 692
|| || |||| || ||||| | | | | || | | | | || || || |||
Sbjct 1002273 CTCCTGACTCTACTAAGCACCCG---CAATACAGATCTCAATGTCCAAGAGAACGAAGAG 1002329
Query 693 ATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGC 752
|| ||| | || || || || | | || ||||| || | ||||| | |||||
Sbjct 1002330 ATTACTACACTCTATCAAGCTACGCTTGCCATTCGGCCAAAACTCATCGAATTGATTGGA 1002389
Query 753 AAGTATTCGCAAAAGAAGGGTAAGTGG--AATCTTTTACGCGAATTTGTGTGTTGGCCAC 810
|| |||||||||||||| ||||| | | || ||| | | ||| || | |
Sbjct 1002390 AAATATTCGCAAAAGAAAGGTAATCAGCCAGTCGTTT--GTTACACCGTGGATTTCCGGC 1002447
Query 811 TGATCGTGT-TCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCG 869
| | ||||| | |||||| ||||| |||||||| || |||||||||||||| || ||||
Sbjct 1002448 TTA-CGTGTGTTTAGATGAATTCACCCAGCTCAATGAAAAGTTCATCAAGGCTCGTCGCG 1002506
Query 870 ACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915
|||| || |||||||||| || ||| | | || || ||||||||
Sbjct 1002507 ACTATGAGTCCCTCCTTGAGGCATCGCTAGCCCATCCGGCGCAGCC 1002552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945597209520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |