Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F001939915.1_202017-01-
09] 1,168 sequences; 26,071,999 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq108 260 4e-66
>seq108
Length=51688
Score = 260 bits (288), Expect = 4e-66
Identities = 635/946 (67%), Gaps = 47/946 (5%)
Strand=Plus/Minus
Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66
||||| | ||||| || ||||| |||| |||||||| ||||||||| | ||||| |
Sbjct 11329 TCAAGTCTAAGATTCTAGAGCGCATGGAAGAATGGACTGAGATGTTCTCATCCAACCCGG 11270
Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGAT-CAA 125
|| ||||||||||||| ||||| || |||| | || || |||| || | | | |
Sbjct 11269 ATTTTGGCATCATGGAACAGGCATACATGAAATTAAAAACCACAAGTAAGTATCTTTCTA 11210
Query 126 C-TCTGGTTCGTTGGGAGC-ACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCCGT 183
| || | | || || ||||| | | || |||||| || |||| || ||||
Sbjct 11209 CGTCCTATACTCCGGACGCGACTGATTA---TATTACAGACCCGAATCTGCAGCCACCGT 11153
Query 184 CGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTAC 243
|||||||| ||| ||||||| ||| || || |||| ||| |||||||| | |
Sbjct 11152 CGAAACCTGGAAAGCGTGAGATCACCGACGTCGATCGTCAGATGGAGGAGGAGGAATTGC 11093
Query 244 AGATGGCGCTGGCACTCTCCGTCAAGGA--AAGCGGGACCGA--GC--CATCCGCCGC-- 295
||||||| |||| ||||| | ||||| |||| |||| || | || || ||
Sbjct 11092 AGATGGCTTTGGCCCTCTCGATTAAGGATAAAGCAACACCGGCGGCTGCTTCTGCGGCAG 11033
Query 296 CAGGTCCAAC-----------CAGCCGCAA--GCAAAAGCCCCA----CAACAATCCGCC 338
|| || | | | || || ||| || || | |||| ||
Sbjct 11032 CACCTCGAGCTGAGGCTCCTTCTGCTGCTGTTGCATCGGCATCAGCTGCCACAACCCAAG 10973
Query 339 CCGGAACAAGAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGC 398
||| | | || |||| || | || || || | | ||| ||||| || ||
Sbjct 10972 G-GGAGCCCGCCGAGACTCAACCTGCTCTCTCAGGCACATCGGTAGCGACCGTGTCGCGT 10914
Query 399 GTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGC 458
|| | || || | ||||||| || || || || || ||| | |||||||| |||
Sbjct 10913 GTGAGAGCGCTGTTCGACTTCCAACCGTCCGAGCCAGGAGAGCTTCAATTCCGCAAGGGC 10854
Query 459 GACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGA 518
|| | ||||| || || |||||||| |||||||| |||||||||||||||||| | ||
Sbjct 10853 GATACCATTGCAGTCCTGGAGTCTGTTTACAAGGATTGGTGGAAGGGTTCTCTGAGAGGC 10794
Query 519 CAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAG 578
|||||||| || ||||| ||||||||||| ||||| || | || || || || |||
Sbjct 10793 CAGACCGGAATTTTCCCTCTCAACTATGTGGAGAAACTCCCAGACCCCACTGTCGATGAG 10734
Query 579 CTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAG 638
| || | || ||||| ||||||||||| ||||||| ||||||||| || ||||||
Sbjct 10733 TTGCAGCGGGAGGCTCAAATGGAGGCGGACGTCTTTGGCCAGATCAAGAGTGTTGAGAAG 10674
Query 639 CTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCGA-CGCTAGG-----GACAATGAGGAG 692
|| || |||| || ||||| | | | | || | | | | || || || |||
Sbjct 10673 CTCCTGACTCTACTAAGCACCCG---CAATACAGATCTCAATGTCCAAGAGAACGAAGAG 10617
Query 693 ATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGC 752
|| ||| | || || || || | | || ||||| || | ||||| | |||||
Sbjct 10616 ATTACTACACTCTATCAAGCTACGCTTGCCATTCGGCCAAAACTCATCGAATTGATTGGA 10557
Query 753 AAGTATTCGCAAAAGAAGGGTAAGTGG--AATCTTTTACGCGAATTTGTGTGTTGGCCAC 810
|| |||||||||||||| ||||| | | || ||| | | ||| || | |
Sbjct 10556 AAATATTCGCAAAAGAAAGGTAATCAGCCAGTCGTTT--GTTACACCGTGGATTTCCGGC 10499
Query 811 TGATCGTGT-TCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCG 869
| | ||||| | |||||| ||||| |||||||| || |||||||||||||| || ||||
Sbjct 10498 TTA-CGTGTGTTTAGATGAATTCACCCAGCTCAATGAAAAGTTCATCAAGGCTCGTCGCG 10440
Query 870 ACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915
|||| || |||||||||| || ||| | | || || ||||||||
Sbjct 10439 ACTATGAGTCCCTCCTTGAGGCATCGCTAGCCCATCCGGCGCAGCC 10394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945396294960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |