Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09- 29] 228 sequences; 34,025,097 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1 233 6e-58 >seq1 Length=4666273 Score = 233 bits (258), Expect = 6e-58 Identities = 631/954 (66%), Gaps = 65/954 (7%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | |||||| | ||||| |||| |||||| | |||||| | |||||||| Sbjct 3955671 TCAAGTCCAAGATCTTGGAGCGGATGGAAGAATGGGCTACCATGTTCTCATCTAACCCTG 3955612 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCG-TGTGATCA- 124 | |||| || ||||| || || || |||| ||| ||||| ||||||| | | |||| | Sbjct 3955611 ACTTTGGAATTATGGATCAAGCTTACATGAAGCTGAAGACTCAAAGTGAGATTTGATTAT 3955552 Query 125 -ACTCTGGTTCGTTGGGAGCACTGACCAACGTGT-TGTAGACCCTAACCTGCGACCTCCG 182 | | | | || ||| | || | | | | ||||||| || || | ||||| Sbjct 3955551 TAAAAAGTATTGCTG--AGCGGTCACTGATGCTTCTCTAGACCCCAATCTTCAGCCTCCA 3955494 Query 183 TCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTA 242 || || || ||||| ||||| ||| || || |||||||| ||||| ||||| Sbjct 3955493 TCAAAGCCAGTGAAGAGTGCAATCACAGACATCGATCGGCAGAAGGAGGAGGAAGAGCTT 3955434 Query 243 CAGATGGCGCTGGCACTCTCCGTCAAGGA--AAGCGGGACCGAGCCATC-CGCCGCCAG- 298 |||||||| ||||| || || || || || |||| || || | | || | | || Sbjct 3955433 CAGATGGCTCTGGCTCTTTCGGTGAAAGAGAAAGC----CCCAGTCCCCACGGCACAAGC 3955378 Query 299 --GTCCAAC--CAGCCGCAAGCAAAAGCCCC---ACA----ACAATCCGCCCCGGAACAA 347 | || | |||| ||| || ||||| || || | | |||| | | Sbjct 3955377 GAGCTCATCTGCAGCTGCA-GCTGCGGCCCCTAGACCGGAGACGAGCTCACCCGCAGCCG 3955319 Query 348 GAGCAGCATCAAGCTATTGCATCTGGAAC------------CACAGCAG---CTACCGTC 392 ||| || ||| ||| ||||| | |||| | | ||||||| Sbjct 3955318 ----AGCTACAGGCTGCTGCTCCTGGACCTGCTCTCTCGGGCACATCGGTCGCTACCGTG 3955263 Query 393 TCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGC 452 || || || || || || | ||||||| ||| || || | || ||| | |||||| Sbjct 3955262 TCGCGTGTCCGAGCTCTCTTCGACTTCCAGCCGTCCGAGGCTGGAGAGCTTCAATTCCGC 3955203 Query 453 AAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTG 512 || |||||||| ||||| || | || || |||||||| || |||||||||||||| || Sbjct 3955202 AAGGGCGACATCATTGCTGTCTTGGAATCAGTGTACAAAGATTGGTGGAAGGGTTCATTG 3955143 Query 513 CGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAG 572 | |||||||| || || ||||| || || || || |||||||| ||||| || Sbjct 3955142 AGGGGACAGACTGGAATTTTCCCTCTGAATTACGTTGAGAAGCTCTCCGATCCAACTGTC 3955083 Query 573 GAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTG 632 || || | || | ||||| |||||||||| || || |||| | |||||||| || Sbjct 3955082 GAAGAATTGCAGCGCGAAGCACAGATGGAGGGCGACGTTTTTGGCCAAATCAAGAATGTC 3955023 Query 633 GAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCG------ACGCTAGGGACAAT 686 |||||||| | | || | |||||| | ||| ||| | || || || Sbjct 3955022 GAGAAGCTCTTGACGCTTTTAAGCACTCG---GAGCTCCGATCTTAATGCCCAAGAAAAC 3954966 Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746 || |||||||| | || |||||| || | |||| || ||||| ||||||||| | Sbjct 3954965 GAAGAGATCACCGCTCTTTACCACTCTACCCTTGCGATTCGACCGAAATTGATCGAGTTG 3954906 Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAAGT-----GGAATCTTTTACGCGAATTTGTGT 801 ||||| ||||||||||| ||||||||| ||| |||| || |||| || Sbjct 3954905 ATTGGAAAGTATTCGCAGAAGAAGGGTGAGTTTATGTCAATCGTT-----GAATCCGT-C 3954852 Query 802 GTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGC 861 ||| | | | | ||| |||||| ||||| |||||||| || |||||||| ||||| Sbjct 3954851 GTTCTCAAACTAACTGCTTCTAGATGAATTCACCCAGCTCAATGAAAAGTTCATTAAGGC 3954792 Query 862 ACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915 ||||| ||||||||| | || | || || || ||| | || ||||| || || Sbjct 3954791 TCGCCGTGACTACGAATCGCTGTTGGAGGCTTCTATGGCCCAGCCAGCACAACC 3954738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945560235660