Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20sclerotiorum_20[genbank_20GCA_5F001750025.1_202016-09-
29] 228 sequences; 34,025,097 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1 233 6e-58
>seq1
Length=4666273
Score = 233 bits (258), Expect = 6e-58
Identities = 631/954 (66%), Gaps = 65/954 (7%)
Strand=Plus/Minus
Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66
||||| | |||||| | ||||| |||| |||||| | |||||| | ||||||||
Sbjct 3955671 TCAAGTCCAAGATCTTGGAGCGGATGGAAGAATGGGCTACCATGTTCTCATCTAACCCTG 3955612
Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCG-TGTGATCA- 124
| |||| || ||||| || || || |||| ||| ||||| ||||||| | | |||| |
Sbjct 3955611 ACTTTGGAATTATGGATCAAGCTTACATGAAGCTGAAGACTCAAAGTGAGATTTGATTAT 3955552
Query 125 -ACTCTGGTTCGTTGGGAGCACTGACCAACGTGT-TGTAGACCCTAACCTGCGACCTCCG 182
| | | | || ||| | || | | | | ||||||| || || | |||||
Sbjct 3955551 TAAAAAGTATTGCTG--AGCGGTCACTGATGCTTCTCTAGACCCCAATCTTCAGCCTCCA 3955494
Query 183 TCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTA 242
|| || || ||||| ||||| ||| || || |||||||| ||||| |||||
Sbjct 3955493 TCAAAGCCAGTGAAGAGTGCAATCACAGACATCGATCGGCAGAAGGAGGAGGAAGAGCTT 3955434
Query 243 CAGATGGCGCTGGCACTCTCCGTCAAGGA--AAGCGGGACCGAGCCATC-CGCCGCCAG- 298
|||||||| ||||| || || || || || |||| || || | | || | | ||
Sbjct 3955433 CAGATGGCTCTGGCTCTTTCGGTGAAAGAGAAAGC----CCCAGTCCCCACGGCACAAGC 3955378
Query 299 --GTCCAAC--CAGCCGCAAGCAAAAGCCCC---ACA----ACAATCCGCCCCGGAACAA 347
| || | |||| ||| || ||||| || || | | |||| | |
Sbjct 3955377 GAGCTCATCTGCAGCTGCA-GCTGCGGCCCCTAGACCGGAGACGAGCTCACCCGCAGCCG 3955319
Query 348 GAGCAGCATCAAGCTATTGCATCTGGAAC------------CACAGCAG---CTACCGTC 392
||| || ||| ||| ||||| | |||| | | |||||||
Sbjct 3955318 ----AGCTACAGGCTGCTGCTCCTGGACCTGCTCTCTCGGGCACATCGGTCGCTACCGTG 3955263
Query 393 TCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGC 452
|| || || || || || | ||||||| ||| || || | || ||| | ||||||
Sbjct 3955262 TCGCGTGTCCGAGCTCTCTTCGACTTCCAGCCGTCCGAGGCTGGAGAGCTTCAATTCCGC 3955203
Query 453 AAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTG 512
|| |||||||| ||||| || | || || |||||||| || |||||||||||||| ||
Sbjct 3955202 AAGGGCGACATCATTGCTGTCTTGGAATCAGTGTACAAAGATTGGTGGAAGGGTTCATTG 3955143
Query 513 CGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAG 572
| |||||||| || || ||||| || || || || |||||||| ||||| ||
Sbjct 3955142 AGGGGACAGACTGGAATTTTCCCTCTGAATTACGTTGAGAAGCTCTCCGATCCAACTGTC 3955083
Query 573 GAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTG 632
|| || | || | ||||| |||||||||| || || |||| | |||||||| ||
Sbjct 3955082 GAAGAATTGCAGCGCGAAGCACAGATGGAGGGCGACGTTTTTGGCCAAATCAAGAATGTC 3955023
Query 633 GAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCG------ACGCTAGGGACAAT 686
|||||||| | | || | |||||| | ||| ||| | || || ||
Sbjct 3955022 GAGAAGCTCTTGACGCTTTTAAGCACTCG---GAGCTCCGATCTTAATGCCCAAGAAAAC 3954966
Query 687 GAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTC 746
|| |||||||| | || |||||| || | |||| || ||||| ||||||||| |
Sbjct 3954965 GAAGAGATCACCGCTCTTTACCACTCTACCCTTGCGATTCGACCGAAATTGATCGAGTTG 3954906
Query 747 ATTGGCAAGTATTCGCAAAAGAAGGGTAAGT-----GGAATCTTTTACGCGAATTTGTGT 801
||||| ||||||||||| ||||||||| ||| |||| || |||| ||
Sbjct 3954905 ATTGGAAAGTATTCGCAGAAGAAGGGTGAGTTTATGTCAATCGTT-----GAATCCGT-C 3954852
Query 802 GTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGC 861
||| | | | | ||| |||||| ||||| |||||||| || |||||||| |||||
Sbjct 3954851 GTTCTCAAACTAACTGCTTCTAGATGAATTCACCCAGCTCAATGAAAAGTTCATTAAGGC 3954792
Query 862 ACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCC 915
||||| ||||||||| | || | || || || ||| | || ||||| || ||
Sbjct 3954791 TCGCCGTGACTACGAATCGCTGTTGGAGGCTTCTATGGCCCAGCCAGCACAACC 3954738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945560235660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |