Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F001750005.1_202016-09-29] 91 sequences; 31,778,960 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1 233 6e-58 >seq1 Length=5141995 Score = 233 bits (258), Expect = 6e-58 Identities = 380/543 (70%), Gaps = 17/543 (3%) Strand=Plus/Plus Query 383 AGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTT 442 ||||||||| || || || | || | | ||||||| || || || || || ||| | Sbjct 4393036 AGCTACCGTGTCACGTGTGAGAGCGTTGTTCGACTTCCAACCGTCTGAGCCAGGAGAGCT 4393095 Query 443 GGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAA 502 |||||||||||||| | || || || || |||||||| |||||||| |||||||| Sbjct 4393096 TCAATTCCGCAAAGGCGATACCATCGCAGTCCTGGAGTCTGTTTACAAGGATTGGTGGAA 4393155 Query 503 GGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGA 562 ||| || ||| | || |||||||| || ||||| ||||| ||||| ||||| || | || Sbjct 4393156 GGGCTCCCTGAGAGGCCAGACCGGAATTTTCCCTCTCAATTATGTGGAGAAACTCCCAGA 4393215 Query 563 TCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGAT 622 || || | ||||| || |||| ||||||||||||||||| ||||||| |||| Sbjct 4393216 CCCCACAGTTGGTGAGCTGCAGCGAGAGGCTCAGATGGAGGCGGACGTCTTTGGCCAGAT 4393275 Query 623 CAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCGA-CGCTAGG- 680 ||||| ||| ||||| || || | || |||||||| | | | | || | | | | Sbjct 4393276 CAAGAGCGTTGAGAAACTCCTGACCCTACTGAGCACCCG---CAATACAGACCTCAATGT 4393332 Query 681 ----GACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTT 736 || || || ||||| ||| | || || || || | |||| || || || | Sbjct 4393333 CCAAGAAAACGAAGAGATTACTACACTCTATCAAGCTACGCTTGCGATTCGTCCAAAACT 4393392 Query 737 GATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG--TGGAATCTTTTAC--GCG 792 ||||| | ||||| || |||||||||||||| |||||| || || || | | Sbjct 4393393 CATCGAATTGATTGGGAAATATTCGCAAAAGAAAGGTAAGCAGCGAGTCGTTCGCTTTCC 4393452 Query 793 AATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTT 852 || ||| ||| || || || |||||| ||||| |||||||| || ||||| Sbjct 4393453 CATGGATGTCTTGCTTACATAT----GTCTAGATGAATTCACCCAGCTCAATGAAAAGTT 4393508 Query 853 CATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCA 912 |||||| || || || ||||| || |||| ||||| || ||| | | |||||||| || Sbjct 4393509 CATCAAAGCTCGTCGTGACTATGAGTCCCTTCTTGAGGCATCGCTAGCCCAACCAGCACA 4393568 Query 913 GCC 915 ||| Sbjct 4393569 GCC 4393571 Score = 95.1 bits (104), Expect = 4e-16 Identities = 185/269 (69%), Gaps = 7/269 (3%) Strand=Plus/Plus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | ||||| || |||||||||| |||||||| ||||||||||| || || | Sbjct 4392632 TCAAGTCCAAGATTCTGGAGCGTATGGAAGAATGGACTGAGATGTTCGCATCCAATCCGG 4392691 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGT--GCGTGTGATCA 124 || ||||||||||||| ||||| || |||| | || | |||| | || || || Sbjct 4392692 ATTTTGGCATCATGGAACAGGCATACATGAAATTAAAATCTACAAGTAAGTGTTTGTTCT 4392751 Query 125 AC-TCTGGTTCGTTG-GGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCCG 182 || || | | ||| | |||| | | || ||||||| || ||| || ||| Sbjct 4392752 ACGCCTTGAACATTGTGCTTGGCTGATTA---TATTATAGACCCGAATTTGCAGCCACCG 4392808 Query 183 TCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTA 242 |||||||| ||| ||||||| || || || |||| ||| || ||||| | Sbjct 4392809 TCGAAACCCGGAAAGCGTGAGATCACCGATGTTGATCGTCAGATGGAGGAAGAGGAATTG 4392868 Query 243 CAGATGGCGCTGGCACTCTCCGTCAAGGA 271 |||||||| || || ||||| | ||||| Sbjct 4392869 CAGATGGCCCTAGCCCTCTCGATTAAGGA 4392897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945584129145