Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20solitum_20[genbank_20GCA_5F002072235.1_202017-03-24] 598 sequences; 33,213,390 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1 223 1e-54 >seq1 Length=3081676 Score = 223 bits (246), Expect = 1e-54 Identities = 379/544 (70%), Gaps = 19/544 (3%) Strand=Plus/Plus Query 383 AGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTT 442 ||||||||| || || || | || | | ||||||| || || || || || ||| | Sbjct 1118234 AGCTACCGTGTCGCGTGTGAGAGCGTTGTTCGACTTCCAACCATCTGAGCCAGGAGAGCT 1118293 Query 443 GGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAA 502 ||||||||||| || | ||||| || || |||||||| |||||||| |||||||| Sbjct 1118294 TCAATTCCGCAAAGGTGATACCATTGCAGTCCTGGAGTCTGTTTACAAGGATTGGTGGAA 1118353 Query 503 GGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGA 562 ||| || ||| | || |||||||| || ||||| ||||| ||||| ||||| || | || Sbjct 1118354 GGGCTCCCTGAGAGGCCAGACCGGAATTTTCCCTCTCAATTATGTGGAGAAACTCCCAGA 1118413 Query 563 TCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGAT 622 || || | ||||| || |||| ||||||||||||||||| ||||||| |||| Sbjct 1118414 CCCCACAGTCGGTGAGCTGCAGCGAGAGGCTCAGATGGAGGCGGACGTCTTTGGCCAGAT 1118473 Query 623 CAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGTGCCGACGCT--AGG 680 ||||| || ||||| || || |||| |||||||| | | | | ||| || | | Sbjct 1118474 CAAGAGTGTCGAGAAACTCCTGACTCTACTGAGCACCCG---CAATACAGAC-CTGAATG 1118529 Query 681 -----GACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGT 735 || || || ||||| ||| | || || || || | |||| || || || Sbjct 1118530 TCCAAGAAAACGAAGAGATTACTACACTCTATCAAGCTACGCTTGCGATTCGTCCCAAAC 1118589 Query 736 TGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAG--TGGAATCTTTTAC--GC 791 | ||||| | ||||| || |||||||||||||| |||||| || || || | | Sbjct 1118590 TCATCGAATTGATTGGGAAATATTCGCAAAAGAAAGGTAAGCAGCGAGTCGTTCGCTTTC 1118649 Query 792 GAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGAGAAGT 851 || || ||| || || || |||||| ||||| |||||||| || |||| Sbjct 1118650 CCATGGATGCCTTGCTTACATAT----GTCTAGATGAATTCACCCAGCTCAATGAAAAGT 1118705 Query 852 TCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGC 911 ||||||| || || || ||||| || |||||||||| || || | | ||||| || | Sbjct 1118706 TCATCAAAGCTCGTCGTGACTATGAGTCCCTCCTTGAGGCATCCCTAGCCCAACCGGCAC 1118765 Query 912 AGCC 915 |||| Sbjct 1118766 AGCC 1118769 Score = 107 bits (118), Expect = 6e-20 Identities = 190/270 (70%), Gaps = 9/270 (3%) Strand=Plus/Plus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | |||||||| ||||| |||| |||||||| ||||||||||| ||||| | Sbjct 1117824 TCAAGTCTAAGATCCTGGAGCGCATGGAAGAATGGACTGAGATGTTCGCATCCAACCCGG 1117883 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACA-AAGT--GCGTGTGATC 123 || ||||||||||||| ||||| || |||| |||| | || |||| | || || || Sbjct 1117884 ATTTTGGCATCATGGAACAGGCATACATGA-AATTAAAATCCACAAGTAAGTGTTTGTTC 1117942 Query 124 AAC-TCTGGTTCGTTG-GGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCTCC 181 || ||| | ||| | |||| | | || ||||||| || ||| || || Sbjct 1117943 GACGTCTTGAATATTGTGCTTGGCTGATTA---TATTATAGACCCGAATTTGCAGCCACC 1117999 Query 182 GTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCT 241 |||||||||| ||| ||||||| || || || |||| ||| || ||||| | Sbjct 1118000 GTCGAAACCTGGAAAGCGTGAGATCACCGATGTCGATCGTCAGATGGAGGAAGAGGAATT 1118059 Query 242 ACAGATGGCGCTGGCACTCTCCGTCAAGGA 271 |||||||| || || ||||| | ||||| Sbjct 1118060 GCAGATGGCCCTAGCCCTCTCGATTAAGGA 1118089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945495705810