Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pestalotiopsis_20sp._20JCM_209685_20[genbank_20GCA_5F001599175.1_202
016-03-01] 13 sequences; 48,230,023 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq5 197 4e-47
>seq5
Length=5891385
Score = 197 bits (218), Expect = 4e-47
Identities = 287/403 (71%), Gaps = 3/403 (1%)
Strand=Plus/Plus
Query 372 GGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCGGAA 431
||||| || ||||| || ||||| ||||| ||||| | || ||||| || |||
Sbjct 5174399 GGAACGACGGCAGCAACGGTCTCTCGCGTCCGCGCTTTGTATGACTTTGTCCCGAGCGAA 5174458
Query 432 CCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTACAAG 491
|| || ||| | | ||| || |||||| |||| || || || || || || | ||||
Sbjct 5174459 CCTGGAGAGCTCGAGTTCAAGAAGGGCGACGTTATCGCAGTGCTGGAATCCGTCTTCAAG 5174518
Query 492 GACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTCGAG 551
||||||||| || | || || | |||||||| ||||| || |||||||||||
Sbjct 5174519 GACTGGTGGCGAGGAAGTTTGAAGGGCAACACCGGCATTTTCCCGCTGAACTATGTCGAA 5174578
Query 552 AAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAAGTC 611
||| || || || || || ||||| | | ||||| ||||||||||| || |||
Sbjct 5174579 AAGTTGACTGACCCAACGCCCGACGAGCTGCACCGTGAAGCACAGATGGAGGCCGAGGTC 5174638
Query 612 TTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGTG-- 669
||||| ||||||||||| || |||||||| || | || |||| || ||| | ||
Sbjct 5174639 TTTGCCGAGATCAAGAATGTCGAGAAGCTCCTTACCCTCTTGAGTACCAGTAATACTGCT 5174698
Query 670 CCGACGCTAG-GGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATACGG 728
|||| || ||||||||||||||| | |||||||||| |||| || | || |||
Sbjct 5174699 CCGAGAGAAGAGGACAATGAGGAGATTTCAAAGCTGTACCACCAGACGTTGGCTATTCGG 5174758
Query 729 CCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGG 771
|| ||| ||||| |||| || | || || || ||||||||||
Sbjct 5174759 CCAAAGCTGATCAAGCTGATCGAGAAATACTCCCAAAAGAAGG 5174801
Score = 78.8 bits (86), Expect = 3e-11
Identities = 77/97 (79%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 827 GATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTT 886
|||||||||||||| ||||| |||||||||||||| || | |||||||| || | ||
Sbjct 5174804 GATTTCACGCAGCTGAACGAAAAGTTCATCAAGGCCCGGAGAGACTACGAGTCCTTGCTG 5174863
Query 887 GAAGCCTCGATGTCGCAACCAGCGCAGCCCG-GCTAC 922
||| | || |||||||| || | | ||||| |||||
Sbjct 5174864 GAATCATCCATGTCGCATCC-TCCCGGCCCGAGCTAC 5174899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945597732735
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |