Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phaeomoniella_20chlamydospora_20[genbank_20GCA_5F001006345.1_202015- 05-13] 702 sequences; 27,513,354 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq190 318 2e-83 >seq190 Length=201213 Score = 318 bits (352), Expect = 2e-83 Identities = 616/890 (69%), Gaps = 38/890 (4%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | |||||||| ||||| |||| || |||||| ||||||| || || ||||| | Sbjct 105768 TCAAGTCCAAGATCCTGGAGCGGATGGCAGAGTGGACGAAGATGTTTGCAAGCAACCCGG 105709 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTG-TGAT-CA 124 | ||||| ||||||||||| || || |||| | || ||||||||| || ||| || Sbjct 105708 ACCTTGGGATCATGGAGCAAGCATACATGAAATTAAAAACACAAAGTATGTACTGAGACA 105649 Query 125 ACTCTGGTTCGTTGGGAGCACTGACCAACGTG--TTG-TAGACCCTAACCTGCGACCTCC 181 | | | ||| | |||||| | ||| ||||||| || || | ||| || Sbjct 105648 A-----GAACTTTGCGCCGGATGACCATCTAAAATTGCTAGACCCAAATCTTCAACCACC 105594 Query 182 GTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCT 241 | ||| ||| ||| || || || || ||||||||||| || || ||||| Sbjct 105593 GCAAGCCCCTACCAAGCGCCAAATTACAGATATCGATCGCCAGAAGGAGGAAGAAGAGCT 105534 Query 242 ACAGATGGCGCTGGCACTCTCCGTCAAGGA-AAGCGGGA--CCGAGCCATCCGCCGCCAG 298 ||||||||| ||| || || || |||| |||| | | | ||| | || | Sbjct 105533 ACAGATGGCTCTGAAGCTGTCAGTGCAGGAGAAGCCAGCTTCACAACCAGCTGCGAAGAA 105474 Query 299 -GTCCAACCAGCCG--CAAGCAAAAGCCCCACAACAATCCGCCCCGGAACAAGAGCAGCA 355 | ||||||| | | | || | | | ||| |||| | ||| |||| Sbjct 105473 AGACCAACCATCGGACCTCTCAGGTGGTGCTCCACAT---GCCCAG---CAATCTCAGCC 105420 Query 356 TCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGA 415 ||||| | | || || || || || || || ||||| | || | || |||| ||| Sbjct 105419 ACAAGCGGTGCCTTCAGGCACTACGGCTGCCACGGTCTCAAGAGTGAGAGCACTTTTCGA 105360 Query 416 CTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCT 475 |||| ||||||||||| || || ||| |||||||| || || ||||||| ||||| Sbjct 105359 CTTCCAACCCTCGGAACCAGGAGAATTGCAGTTCCGCAAGGGTGATGTTATTGCTGTTCT 105300 Query 476 CGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCC 535 |||||||||||||| || |||||||||||||| || | ||||||||||| |||||||| Sbjct 105299 GGAGTCTGTGTACAAAGATTGGTGGAAGGGTTCATTGAGAGGACAGACCGGAATCTTCCC 105240 Query 536 CCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCA 595 | | ||||| ||||| ||| || || || || | || || || |||| |||||||| Sbjct 105239 CTTGAACTACGTCGAAAAGTTGTCTGACCCGACGCAAGAAGAACTTCAGAGGGAAGCTCA 105180 Query 596 GATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAG 655 |||||| || || || || | ||||||||||||| ||||| ||||| ||| |||| || Sbjct 105179 GATGGAAGCCGAGGTTTTCGGACAGATCAAGAACGTCGAGAAACTGCTTGCTTTGCTAAG 105120 Query 656 CAC---TAGTTCGAGTGCCGAC-GCTAGGGACAATGAGGAGATCACTTCGCTGTACCACA 711 ||| ||| |||| | ||| | || || ||||| ||||| || | ||||| | Sbjct 105119 CACGAGTAGCTCGA-ACCTGACGGAAAGAGATAATGAAGAGATAACGACATTGTACAATT 105061 Query 712 AGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGG 771 |||| || ||||| |||| ||| ||||||| || ||||| |||||| | |||| ||| | Sbjct 105060 CGACACTGGCGATAAGGCCCAAGCTGATCGAACTAATTGGGAAGTATACCCAAAGGAAAG 105001 Query 772 GTA--AGTGGAATCTTTTACGCGAATTTGTGTGTTGGCCACTGA---TCGTGTTCCAGAT 826 ||| ||| ||| | | || | ||| | ||| |||||| ||| | |||| Sbjct 105000 GTATGAGTCAAAT-TGTCACAC--CTTTATCAAATGGACACTGACATTCGAG---AAGAT 104947 Query 827 GATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGA 876 ||| | |||| | |||||||| |||||||| ||||| || ||||| || Sbjct 104946 GATCTTTCGCAATTGAACGAGAAATTCATCAAAGCACGACGAGACTATGA 104897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945477567690