Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20scopiformis_20[genbank_20GCA_5F001500285.1_202016-
01-07] 71 sequences; 48,876,257 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq2 172 2e-39
>seq2
Length=1957112
Score = 172 bits (190), Expect = 2e-39
Identities = 215/292 (74%), Gaps = 2/292 (1%)
Strand=Plus/Plus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTT-CACGCCCTC 427
|| || |||||||||||||| ||||| | || | || || | |||||| |||| | |
Sbjct 381028 TCGGGTACCACAGCAGCTACTGTCTCGAGAGTGAGAGCACTATTCGACTTCCACG-CGAC 381086
Query 428 GGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTA 487
|| || | ||||||| ||||||| ||||||||||| || || || || |||||||| ||
Sbjct 381087 CGATCCTGACGAGTTGACTTTCCGAAAAGGCGACATCATCGCTGTCCTAGAGTCTGTCTA 381146
Query 488 CAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGT 547
|||||| ||||||||||| || | ||||| || || |||||||| | ||||||||
Sbjct 381147 CAAGGATTGGTGGAAGGGGCTGCTCAGAGGACAAACTGGTATCTTCCCGTTGAACTATGT 381206
Query 548 CGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607
||||||||| ||||| || || || | | | || || || ||||| || ||
Sbjct 381207 TGAGAAGCTGGCAGATCCGACTCCAGAAGAATTACAACGGGAGGCACAAATGGAAGCAGA 381266
Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659
|| |||||||| || ||||| || |||||||| || | | ||||||||
Sbjct 381267 GGTGTTTGCGGAAATTAAGAATGTTGAGAAGCTCCTTACATTATTGAGCACT 381318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945587617245
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |