Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12-
03] 205 sequences; 69,693,031 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq67 179 1e-41
>seq67
Length=3716956
Score = 179 bits (198), Expect = 1e-41
Identities = 216/291 (74%), Gaps = 2/291 (1%)
Strand=Plus/Minus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || |||||||||||||| || || | || | || |||| ||||||| | ||
Sbjct 2062539 TCGGGTACCACAGCAGCTACGGTTTCGAGAGTGAGGGCGCTTTTCGACTTCCATGCGACG 2062480
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|| || | |||| || | ||||| |||||||| || ||||| || | |||||||| ||
Sbjct 2062479 GATCCAGACGAGCTGACCTTCCGGAAAGGCGATATAATTGCTGTGTTGGAGTCTGTATAT 2062420
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
||||| ||||||||||| ||| | || ||||| || |||||||| | || |||||
Sbjct 2062419 AAGGATTGGTGGAAGGGGCTGCTGAGGGGGCAGACTGGTATCTTCCCATTGAATTATGTT 2062360
Query 549 GAGAAGCT-GCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607
|||||||| ||| || || || || || | || |||| || ||||||||||||||
Sbjct 2062359 GAGAAGCTCGCA-GACCCCACACCCGAAGAATTACAGCGAGAGGCCCAGATGGAGGCGGA 2062301
Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658
|| ||||| ||||||||||| || |||||||| || | | ||||||||
Sbjct 2062300 GGTGTTTGCTGAGATCAAGAATGTTGAGAAGCTCCTTACATTACTGAGCAC 2062250
Score = 82.4 bits (90), Expect = 2e-12
Identities = 126/177 (71%), Gaps = 6/177 (3%)
Strand=Plus/Minus
Query 723 ATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAA- 781
|| || |||||| | || ||| | ||||| || || ||||| | ||| |||| || ||
Sbjct 2062133 ATTCGCCCGAAGCTCATTGAGTTGATTGGTAAATACTCGCAGAGGAAAGGTATGTTCAAG 2062074
Query 782 TCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTC 841
|| ||| | || | ||| ||| ||||| || | |||||||||||| |||||
Sbjct 2062073 TCATTTGCACGTGATAGTGCCTTG----CTGATT-TGGCCTAGATGATTTCACACAGCTT 2062019
Query 842 AACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATG 898
|| |||| ||||||||| | |||| ||||| || | ||||| || || ||||||
Sbjct 2062018 AATGAGAGATTCATCAAGTCTTGCCGTGACTATGAGAATCTCCTCGATGCTTCGATG 2061962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945564246975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |