Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialocephala_20subalpina_20[genbank_20GCA_5F900073065.1_202016-12- 03] 205 sequences; 69,693,031 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq67 179 1e-41 >seq67 Length=3716956 Score = 179 bits (198), Expect = 1e-41 Identities = 216/291 (74%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || |||||||||||||| || || | || | || |||| ||||||| | || Sbjct 2062539 TCGGGTACCACAGCAGCTACGGTTTCGAGAGTGAGGGCGCTTTTCGACTTCCATGCGACG 2062480 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || || | |||| || | ||||| |||||||| || ||||| || | |||||||| || Sbjct 2062479 GATCCAGACGAGCTGACCTTCCGGAAAGGCGATATAATTGCTGTGTTGGAGTCTGTATAT 2062420 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 ||||| ||||||||||| ||| | || ||||| || |||||||| | || ||||| Sbjct 2062419 AAGGATTGGTGGAAGGGGCTGCTGAGGGGGCAGACTGGTATCTTCCCATTGAATTATGTT 2062360 Query 549 GAGAAGCT-GCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGA 607 |||||||| ||| || || || || || | || |||| || |||||||||||||| Sbjct 2062359 GAGAAGCTCGCA-GACCCCACACCCGAAGAATTACAGCGAGAGGCCCAGATGGAGGCGGA 2062301 Query 608 AGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCAC 658 || ||||| ||||||||||| || |||||||| || | | |||||||| Sbjct 2062300 GGTGTTTGCTGAGATCAAGAATGTTGAGAAGCTCCTTACATTACTGAGCAC 2062250 Score = 82.4 bits (90), Expect = 2e-12 Identities = 126/177 (71%), Gaps = 6/177 (3%) Strand=Plus/Minus Query 723 ATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAA- 781 || || |||||| | || ||| | ||||| || || ||||| | ||| |||| || || Sbjct 2062133 ATTCGCCCGAAGCTCATTGAGTTGATTGGTAAATACTCGCAGAGGAAAGGTATGTTCAAG 2062074 Query 782 TCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTC 841 || ||| | || | ||| ||| ||||| || | |||||||||||| ||||| Sbjct 2062073 TCATTTGCACGTGATAGTGCCTTG----CTGATT-TGGCCTAGATGATTTCACACAGCTT 2062019 Query 842 AACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATG 898 || |||| ||||||||| | |||| ||||| || | ||||| || || |||||| Sbjct 2062018 AATGAGAGATTCATCAAGTCTTGCCGTGACTATGAGAATCTCCTCGATGCTTCGATG 2061962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945564246975