Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23] 13 sequences; 31,616,172 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1 315 2e-82 >seq1 Length=6061779 Score = 315 bits (348), Expect = 2e-82 Identities = 409/562 (73%), Gaps = 19/562 (3%) Strand=Plus/Plus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || ||||| || || || || || || || ||||| | ||||||| ||||||| Sbjct 4388872 TCCGGCACAACAGCTGCAACGGTGTCGCGAGTACGAGCCCTCTTCGACTTCCAGCCCTCG 4388931 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || ||||||||| | ||||||||||||||| | || || || || || || |||||| Sbjct 4388932 GAGCCCGGCGAGCTACAGTTCCGCAAAGGCGACGTAATAGCCGTGCTAGAATCCGTGTAC 4388991 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 || ||||||||||| ||||| ||||| || ||||| |||||||| || || ||||| || Sbjct 4388992 AAAGACTGGTGGAAAGGTTCACTGCGCGGGCAGACGGGCATCTTTCCTCTGAACTACGTG 4389051 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 |||||||| || ||||| ||| |||||| | ||||||| || ||||| ||||| ||| Sbjct 4389052 GAGAAGCTACAAGATCCCACCCCGGAGGAATTGCAGAGAGAGGCGCAGATCGAGGCCGAA 4389111 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668 || || | | ||||||||||||||||| ||||| || ||| ||||||| ||| || | Sbjct 4389112 GTGTTCGGACAAATCAAGAACGTGGAGAAACTGCTCGCACTGTTGAGCACGAGTACGGGG 4389171 Query 669 GCC---GACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATA 725 | | ||| |||| || |||||||| || ||| || || | ||| || |||| Sbjct 4389172 GACATGAACGTGCGGGATAACGAGGAGATTACCGAGCTATATCAGAGCACACTGGCGATC 4389231 Query 726 CGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTT 785 ||||||||||||| || | ||||| ||||| | || ||||| ||| || | | | | Sbjct 4389232 AGGCCGAAGTTGATTGACTTGATTGGGAAGTACACACAGAAGAAAGGTGAG-GAAGGCGT 4389290 Query 786 TTACGCGAATTTGTGTGTTGGC---------CACTGATCGTGTTC--CAGATGATTTCAC 834 || || || || ||| ||||| | || | ||| || ||| Sbjct 4389291 GCACATGA--GCGTCTGGAGGCGCGTGACTTGACTGACCATGACCGTTAGACGACTTCCA 4389348 Query 835 GCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTC 894 |||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||| | || Sbjct 4389349 ACAGCTCAACGAGAAATTCATAAAGGCCCGCCGCGACTACGAAGCCCTCCTCGAATCGTC 4389408 Query 895 GATGTCGCAACCAGCGCAGCCC 916 ||| | ||| | ||| |||| Sbjct 4389409 CATGGCTCAATC--CGCCGCCC 4389428 Score = 89.7 bits (98), Expect = 2e-14 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | ||||| || ||| | |||| || |||||| ||||||| || ||||| ||| Sbjct 4388499 TCAAGTCTAAGATTCTAGAGAGGATGGAGGAGTGGACGAAGATGTTTGCAAGTAATACTG 4388558 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTG 118 | | ||||||||||||||||| || |||||| | ||| | || |||| ||| Sbjct 4388559 AGTTGGGCATCATGGAGCAGGCGTACATGAGGTTGAAGGCGCAGAGTGAGTG 4388610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945597732735