Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phialophora_20americana_20[genbank_20GCA_5F000835435.1_202015-02-23]
13 sequences; 31,616,172 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq1 315 2e-82
>seq1
Length=6061779
Score = 315 bits (348), Expect = 2e-82
Identities = 409/562 (73%), Gaps = 19/562 (3%)
Strand=Plus/Plus
Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428
|| || || ||||| || || || || || || || ||||| | ||||||| |||||||
Sbjct 4388872 TCCGGCACAACAGCTGCAACGGTGTCGCGAGTACGAGCCCTCTTCGACTTCCAGCCCTCG 4388931
Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488
|| ||||||||| | ||||||||||||||| | || || || || || || ||||||
Sbjct 4388932 GAGCCCGGCGAGCTACAGTTCCGCAAAGGCGACGTAATAGCCGTGCTAGAATCCGTGTAC 4388991
Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548
|| ||||||||||| ||||| ||||| || ||||| |||||||| || || ||||| ||
Sbjct 4388992 AAAGACTGGTGGAAAGGTTCACTGCGCGGGCAGACGGGCATCTTTCCTCTGAACTACGTG 4389051
Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608
|||||||| || ||||| ||| |||||| | ||||||| || ||||| ||||| |||
Sbjct 4389052 GAGAAGCTACAAGATCCCACCCCGGAGGAATTGCAGAGAGAGGCGCAGATCGAGGCCGAA 4389111
Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACTAGTTCGAGT 668
|| || | | ||||||||||||||||| ||||| || ||| ||||||| ||| || |
Sbjct 4389112 GTGTTCGGACAAATCAAGAACGTGGAGAAACTGCTCGCACTGTTGAGCACGAGTACGGGG 4389171
Query 669 GCC---GACGCTAGGGACAATGAGGAGATCACTTCGCTGTACCACAAGACAGTGTCGATA 725
| | ||| |||| || |||||||| || ||| || || | ||| || ||||
Sbjct 4389172 GACATGAACGTGCGGGATAACGAGGAGATTACCGAGCTATATCAGAGCACACTGGCGATC 4389231
Query 726 CGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTT 785
||||||||||||| || | ||||| ||||| | || ||||| ||| || | | | |
Sbjct 4389232 AGGCCGAAGTTGATTGACTTGATTGGGAAGTACACACAGAAGAAAGGTGAG-GAAGGCGT 4389290
Query 786 TTACGCGAATTTGTGTGTTGGC---------CACTGATCGTGTTC--CAGATGATTTCAC 834
|| || || || ||| ||||| | || | ||| || |||
Sbjct 4389291 GCACATGA--GCGTCTGGAGGCGCGTGACTTGACTGACCATGACCGTTAGACGACTTCCA 4389348
Query 835 GCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTC 894
|||||||||||||| ||||| ||||| ||||||||||||||| ||||||| ||| | ||
Sbjct 4389349 ACAGCTCAACGAGAAATTCATAAAGGCCCGCCGCGACTACGAAGCCCTCCTCGAATCGTC 4389408
Query 895 GATGTCGCAACCAGCGCAGCCC 916
||| | ||| | ||| ||||
Sbjct 4389409 CATGGCTCAATC--CGCCGCCC 4389428
Score = 89.7 bits (98), Expect = 2e-14
Identities = 87/112 (78%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66
||||| | ||||| || ||| | |||| || |||||| ||||||| || ||||| |||
Sbjct 4388499 TCAAGTCTAAGATTCTAGAGAGGATGGAGGAGTGGACGAAGATGTTTGCAAGTAATACTG 4388558
Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTG 118
| | ||||||||||||||||| || |||||| | ||| | || |||| |||
Sbjct 4388559 AGTTGGGCATCATGGAGCAGGCGTACATGAGGTTGAAGGCGCAGAGTGAGTG 4388610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945597732735
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |