Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phialophora_20verrucosa_20[genbank_20GCA_5F002099365.1_202017-04-18] 15 sequences; 35,456,005 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq5 331 3e-87 >seq5 Length=2445035 Score = 331 bits (366), Expect = 3e-87 Identities = 654/949 (69%), Gaps = 54/949 (6%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||| | ||||| || ||||| |||| || ||||| ||||||| || ||||| ||| Sbjct 1586389 TCAAGTCGAAGATTCTAGAGCGGATGGAGGAGTGGACCAAGATGTTTGCGAGTAATACTG 1586330 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTG-----TGA 121 | || ||||||||||||||||| || ||| || | ||| | || |||| ||| ||| Sbjct 1586329 AGCTGGGCATCATGGAGCAGGCGTACATGCGGTTGAAGGCGCAGAGTGAGTGCGCCATGA 1586270 Query 122 TCAACTCTG-GTTC-GTTGGGAGCACTGACCAACGTGTTGTAGACCCTAACCTGCGACCT 179 || | | | |||| ||| | ||||| | ||| | ||| || ||||| | ||| Sbjct 1586269 TCCAGCCAGTGTTCAGTTCAGG---CTGACGGCCATGT-GCAGATCCAAACCTCCAACCA 1586214 Query 180 CCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAG 239 || | ||| ||||| | ||||| || | ||||| || ||||| || ||| Sbjct 1586213 CCACAGGCACCGGTGAAGAGCGCCATCACAGATTATGACCGAAGGAGAGAAGACGAAGAG 1586154 Query 240 CTACAGATGGCGCTGGCACTCTCCGTCAAGGA-AAGCGGGA--CCGAGCCATCC-GCC-- 293 ||||||||||| || || || || | || ||| | ||| || || ||| Sbjct 1586153 CTACAGATGGCCCTCAAGCTGTCAATCCAAGACAAGTCTGCTGCCGGTCCCTCGAGCCAA 1586094 Query 294 GC--CAGGTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGCC----CCGGAACAA 347 || ||||| || ||||| || | || |||| | ||| ||| | || Sbjct 1586093 GCATCAGGTGCA-CCAGC----AGAACTGGCGGCACAG-ACGCCGGGAGGTCCGCAGCAG 1586040 Query 348 GAGCAG---CATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGC 404 ||| | |||| | | | || || || ||||| || || || || || || || Sbjct 1586039 CAGCCAATTCCTCAACCCGTCCCCTCCGGCACGACAGCTGCAACGGTGTCGCGAGTACGA 1585980 Query 405 GCCCTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATT 464 ||||| | ||||||| ||||||||| ||||||||| | ||||||||||||||| | Sbjct 1585979 GCCCTCTTCGACTTCCAGCCCTCGGAGCCCGGCGAGCTACAGTTCCGCAAAGGCGACGTA 1585920 Query 465 ATTGCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACC 524 || || || || || || |||||||| ||||||||||| ||||| ||||| |||||||| Sbjct 1585919 ATAGCCGTGCTAGAATCCGTGTACAAAGACTGGTGGAAAGGTTCACTGCGCGGACAGACG 1585860 Query 525 GGCATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAG 584 || ||||| || || ||||| ||||| ||||| || ||||| ||| |||||| | || Sbjct 1585859 GGTATCTTTCCGCTGAACTACGTCGAAAAGCTACAAGATCCCACCCCGGAGGAATTGCAG 1585800 Query 585 AGAGAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTA 644 | ||| || ||||| ||||| ||||| || | ||||||||||||||||||| |||| Sbjct 1585799 AAAGAGGCGCAGATCGAGGCCGAAGTGTTCGGACAGATCAAGAACGTGGAGAAATTGCTC 1585740 Query 645 GCTCTGCTGAGCACTAGTTCGAGTGCC---GACGCTAGGGACAATGAGGAGATCACTTCG 701 || ||| ||||||| || || | | | ||| |||| || |||||||| || | Sbjct 1585739 GCGCTGTTGAGCACGAGCACGGGGGACATGAACGTGCGGGATAACGAGGAGATTACCGAG 1585680 Query 702 CTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCG 761 || || || | ||| || | || ||||||||||||| || | ||||| ||||| || Sbjct 1585679 CTATATCAGAGCACACTGGCCATCAGGCCGAAGTTGATTGACTTGATTGGGAAGTACACG 1585620 Query 762 CAAAAGAAGGGTAAGTGGAATCTTTTACGCGA---ATTTGTG---------TGTTGGCCA 809 || ||||| ||| || | | ||| || || |||||| |||| | Sbjct 1585619 CAGAAGAAAGGTGAG-GAAGACTTGCACATGATGGCTTTGTGGAGGCGCGCAATTGG--A 1585563 Query 810 CTGATCGTGTTC--CAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCG 867 |||| | || | ||| || ||| || ||||||||||| ||||| ||||| ||||| Sbjct 1585562 CTGACCATGACCGTTAGACGACTTCCAACAACTCAACGAGAAATTCATAAAGGCCCGCCG 1585503 Query 868 CGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACCAGCGCAGCCC 916 |||||||||| ||||||| ||| | || ||| | ||| | ||| |||| Sbjct 1585502 CGACTACGAAGCCCTCCTCGAAACGTCCATGGCTCAATC--CGCCGCCC 1585456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945597383925