Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20capitalensis_20[genbank_20GCA_5F001604925.1_202016- 03-31] 1,341 sequences; 32,454,403 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq584 477 3e-131 >seq584 Length=79972 Score = 477 bits (528), Expect = 3e-131 Identities = 698/989 (71%), Gaps = 95/989 (10%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||||| |||||| | ||||| |||| |||||||| || ||||| ||| | ||| | Sbjct 65721 TCAAGGCCAAGATCTTGGAGCGCATGGAAGAATGGACAGAAATGTTTTCCAAGAGCCCAG 65662 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGT-GCGTGTGAT--- 122 | || || |||||||||||||||||||||||||| |||||||||||| || | || Sbjct 65661 AGCTCGGTATCATGGAGCAGGCCTATATGAGGCTCAAGACACAAAGTAGCTCGCCATTCG 65602 Query 123 CAACTCTGGTTCGTTGGGAGCACTGAC---CAACGTGTTGTAGACCCTAACCTGCGACCT 179 ||| | | | ||| | |||||| |||| |||||| | |||||| || Sbjct 65601 CAAATGCCGGACTTTGAT-GTACTGACTCCCAAC-------AGACCCAACCCTGCGTCCC 65550 Query 180 CCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAG 239 |||||||| || ||||| || ||||| || |||||||| ||||| ||||| ||| Sbjct 65549 CCGTCGAAGCCCGGAAAGACGCAAATCACAGAGACGGACCGCGCAAAGGAGGAGGAAGAG 65490 Query 240 CTACAGATGGCGCTGGCACTCTCCGTCAAGGAAAGCG--GGACC-GAGCCATCCGCCGCC 296 || |||||||| |||| || || ||||||||| | | ||| | ||| |||||||| Sbjct 65489 CTGCAGATGGCTTTGGCCCTTTCACTCAAGGAAAACACTGTACCAGCGCCCGCCGCCGCC 65430 Query 297 AGGTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGC---CCCGGAACAAGAGCAG 353 | ||| || ||||| |||| ||| ||| | ||| ||| | | || || Sbjct 65429 AAGTCGAATCAGCC---AGCA---GCCGCACC----TGCGCAGACCCCTAGCCAGC-CAC 65381 Query 354 CATC--AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTT 411 |||| | || ||||| ||||||||||| || || || || || || || |||||||| | Sbjct 65380 CATCGCATGCCATTGCCTCTGGAACCACCGCTGCGACGGTGTCTCGTGTCCGCGCCCTCT 65321 Query 412 ACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGG 471 |||||||||| ||||| || || |||||| |||| || ||||| |||||||||||||| | Sbjct 65320 ACGACTTCACTCCCTCTGAGCCAGGCGAGCTGGCGTTTCGCAAGGGCGACATTATTGCCG 65261 Query 472 TTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCT 531 | || ||||| || |||||||| ||||||||||| ||||||||||| || |||||| | Sbjct 65260 TACTGGAGTCGGTCTACAAGGATTGGTGGAAGGGATCTCTGCGTGGCCAAGTCGGCATTT 65201 Query 532 TCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAG 591 |||| || |||||||||||||||||||||||||| || | ||| ||||| || ||||| | Sbjct 65200 TCCCTCTAAACTATGTCGAGAAGCTGCAGGATCCAACAAGGGAAGAGCTGGAAAGAGAGG 65141 Query 592 CTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGC 651 | ||||||||||| |||||||||| |||| || ||||||||||||||||| || ||| Sbjct 65140 CACAGATGGAGGCCGAAGTCTTTGGCCAGATAAAAAACGTGGAGAAGCTGCTGGCGCTGT 65081 Query 652 TGAGCACTAGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCAC-------------T 698 ||||||| | ||| | || ||||| ||||| || |||||| |||| | Sbjct 65080 TGAGCACAACTTCAACAGCGGACGCGAGGGATAACGAGGAGGTCACGGTAAGTCGAGGGT 65021 Query 699 T------------------------CGCT----------------GTACCACAAGACAGT 718 | |||| ||||||| | || Sbjct 65020 TCGAGGCCGTCGCAGTTCAGTGTGACGCTAATATGCGCAGACATTGTACCACCAAGTGGT 64961 Query 719 GTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTG 778 | |||||||||| ||| |||| ||||||||||| ||||| || |||||||| || ||| Sbjct 64960 GGCGATACGGCCAAAGCTGATTGAGCTCATTGGAAAGTACTCTCAAAAGAAAGGCAAG-- 64903 Query 779 GAATCTTTTACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAG 838 ||| | || | || | || | | || |||| || || ||||| Sbjct 64902 -----TTTGCTGTTGATCCTTCTGGTCATATCT-AACCTGCATCAGACGACTTTACGCAA 64849 Query 839 CTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATG 898 || || || ||||||||||||||||| || ||||| ||| | || | || || || ||| Sbjct 64848 CTGAATGAAAAGTTCATCAAGGCACGGCGAGACTATGAAGCGCTTTTGGAGGCATCCATG 64789 Query 899 TCGCAACCAGCGCAGCCCGGCTACGGTCG 927 || ||| | | ||||| ||||||||||| Sbjct 64788 TCTCAAGCCGGCCAGCCTGGCTACGGTCG 64760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945366122895