Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03-
31] 5,748 sequences; 31,127,197 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq168 452 1e-123
>seq168
Length=4349
Score = 452 bits (500), Expect = 1e-123
Identities = 717/1033 (69%), Gaps = 90/1033 (9%)
Strand=Plus/Plus
Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66
||||||| ||||| || ||||| |||| ||||||||||| ||||| ||| | ||| |
Sbjct 2427 TCAAGGCCAAGATTCTTGAGCGGATGGAGGAATGGACGGAAATGTTTTCCAAGAGCCCAG 2486
Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAAC 126
| || || ||||||||||||||||| |||||||| ||||| |||||| | | | ||
Sbjct 2487 AGCTCGGAATCATGGAGCAGGCCTACATGAGGCTCAAGACTCAAAGTACTTTTTCCCAGT 2546
Query 127 TCTGGTTCG--TTGGGAGCACTGACC-AACGTGTTGTAGACCCTAACCTGCGACCTCCGT 183
| ||| | || | ||||||| |||| |||||| | | |||| || || |
Sbjct 2547 CCCGGTCGGAATTCACAA-ACTGACCCAACGC-----AGACCCAACCTTGCGGCCCCCAT 2600
Query 184 CGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTAC 243
|||| || ||||| || ||||| || ||||||| ||||| ||||| || || |
Sbjct 2601 CGAAGCCCGGAAAGACACAAATCACAGAGACGGACCGTGCAAAGGAGGAGGAAGAACTTC 2660
Query 244 AGATGGCGCTGGCACTCTCCGTCAAGGA-AAGCGGGA--CCGAGCCATCCGCCGCCAGGT 300
||||||| ||||| | || ||||||| || | | ||| || ||||||||| ||
Sbjct 2661 AGATGGCTCTGGCTTTGTCGCTCAAGGAGAATCAAGCACCCGCACCCGCCGCCGCCAAGT 2720
Query 301 CCAACCAGCCGCAAGCAAAAGCCCCA---CAACAATCCGCCCCGGAACAAGAGCAGCATC 357
| || |||||| || || || || || || ||| | || ||||
Sbjct 2721 CAAATCAGCCGGCCGCGTCT-CCGCAGGCCAGCAGTCAGCCGC-----AATCGCAG---- 2770
Query 358 AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACT 417
|| ||||| ||||| || || || || || ||||| ||||| ||||| || |||||||
Sbjct 2771 --GCCATTGCCTCTGGCACAACCGCGGCAACAGTCTCTCGCGTCCGCGCACTCTACGACT 2828
Query 418 TCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCG 477
| ||||| || || || |||||| |||| |||||||| || |||||||| || || ||||
Sbjct 2829 TTACGCCGTCTGAGCCAGGCGAGCTGGCATTCCGCAAGGGTGACATTATCGCTGTGCTCG 2888
Query 478 AGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCC 537
|||| || |||||||| ||||||||||| ||||||||||| ||| |||||| ||||| |
Sbjct 2889 AGTCGGTCTACAAGGATTGGTGGAAGGGCTCTCTGCGTGGCCAGGTCGGCATTTTCCCTC 2948
Query 538 TCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGA 597
|||||||||| ||||| ||||||| || || | || ||||| || ||||| || || |
Sbjct 2949 TCAACTATGTGGAGAAATTGCAGGACCCGACAAGAGAAGAGCTTGAAAGAGAGGCACAAA 3008
Query 598 TGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCA 657
|||| | |||||||||| |||| ||||| || ||||||||||| |||||||| ||||
Sbjct 3009 TGGAAGGCGAAGTCTTTGGCCAGATTAAGAATGTAGAGAAGCTGCTGGCTCTGCTAAGCA 3068
Query 658 CTAGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCAC------TT------------ 699
| | ||| | ||| ||||| ||||||||||||||| |||| ||
Sbjct 3069 CGACTTCTACTGCGGACGCGAGGGACAATGAGGAGGTCACGGTACGTTGAGGCGCGATGG 3128
Query 700 ---------------------------------CGCTGTACCACAAGACAGTGTCGATAC 726
| ||||||||| || ||| ||||||
Sbjct 3129 CGATCGAGTCAGCATGACGCTAACACGTGCAGACTCTGTACCACCAGGTGGTGGCGATAC 3188
Query 727 GGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTTT 786
|||| ||| |||| ||||| ||||| ||||| ||||||||||||||| || ||
Sbjct 3189 GGCCAAAGCTGATTGAGCTGATTGGAAAGTACTCGCAAAAGAAGGGTGAG--------TT 3240
Query 787 TACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGA 846
| | || | | | | | ||| | || | | |||| || || ||||| || || ||
Sbjct 3241 TGC-CGTAATAATTTCGAGCCCATCTAACGCGCTGCAGACGACTTTACGCAACTGAATGA 3299
Query 847 GAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906
|||||||| || ||||| || |||||||| | ||| | || ||||| ||||| ||| |
Sbjct 3300 AAAGTTCATAAAAGCACGGCGAGACTACGAGGCTCTCTTGGAGGCCTCCATGTCTCAAGC 3359
Query 907 AGCGCAGCCCGGCTACGGTCGTCAACCCTATGGCTACGGCGCCGGCGCCCCGCCGCCTCA 966
| ||||| |||||||| || | || | ||||| |||| || |||| || | ||
Sbjct 3360 CGGCCAGCCTGGCTACGGCCGGCCGCCATTTGGCT---GCGCGGGACCCCCACCATCGCA 3416
Query 967 GAGTGCTCCGTAC 979
| | || ||||||
Sbjct 3417 GGGAGCACCGTAC 3429
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15944597520060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |