Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phyllosticta_20citricarpa_20[genbank_20GCA_5F001604955.1_202016-03- 31] 5,748 sequences; 31,127,197 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq168 452 1e-123 >seq168 Length=4349 Score = 452 bits (500), Expect = 1e-123 Identities = 717/1033 (69%), Gaps = 90/1033 (9%) Strand=Plus/Plus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 ||||||| ||||| || ||||| |||| ||||||||||| ||||| ||| | ||| | Sbjct 2427 TCAAGGCCAAGATTCTTGAGCGGATGGAGGAATGGACGGAAATGTTTTCCAAGAGCCCAG 2486 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAAC 126 | || || ||||||||||||||||| |||||||| ||||| |||||| | | | || Sbjct 2487 AGCTCGGAATCATGGAGCAGGCCTACATGAGGCTCAAGACTCAAAGTACTTTTTCCCAGT 2546 Query 127 TCTGGTTCG--TTGGGAGCACTGACC-AACGTGTTGTAGACCCTAACCTGCGACCTCCGT 183 | ||| | || | ||||||| |||| |||||| | | |||| || || | Sbjct 2547 CCCGGTCGGAATTCACAA-ACTGACCCAACGC-----AGACCCAACCTTGCGGCCCCCAT 2600 Query 184 CGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGAGCTAC 243 |||| || ||||| || ||||| || ||||||| ||||| ||||| || || | Sbjct 2601 CGAAGCCCGGAAAGACACAAATCACAGAGACGGACCGTGCAAAGGAGGAGGAAGAACTTC 2660 Query 244 AGATGGCGCTGGCACTCTCCGTCAAGGA-AAGCGGGA--CCGAGCCATCCGCCGCCAGGT 300 ||||||| ||||| | || ||||||| || | | ||| || ||||||||| || Sbjct 2661 AGATGGCTCTGGCTTTGTCGCTCAAGGAGAATCAAGCACCCGCACCCGCCGCCGCCAAGT 2720 Query 301 CCAACCAGCCGCAAGCAAAAGCCCCA---CAACAATCCGCCCCGGAACAAGAGCAGCATC 357 | || |||||| || || || || || || ||| | || |||| Sbjct 2721 CAAATCAGCCGGCCGCGTCT-CCGCAGGCCAGCAGTCAGCCGC-----AATCGCAG---- 2770 Query 358 AAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACT 417 || ||||| ||||| || || || || || ||||| ||||| ||||| || ||||||| Sbjct 2771 --GCCATTGCCTCTGGCACAACCGCGGCAACAGTCTCTCGCGTCCGCGCACTCTACGACT 2828 Query 418 TCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCG 477 | ||||| || || || |||||| |||| |||||||| || |||||||| || || |||| Sbjct 2829 TTACGCCGTCTGAGCCAGGCGAGCTGGCATTCCGCAAGGGTGACATTATCGCTGTGCTCG 2888 Query 478 AGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCC 537 |||| || |||||||| ||||||||||| ||||||||||| ||| |||||| ||||| | Sbjct 2889 AGTCGGTCTACAAGGATTGGTGGAAGGGCTCTCTGCGTGGCCAGGTCGGCATTTTCCCTC 2948 Query 538 TCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGA 597 |||||||||| ||||| ||||||| || || | || ||||| || ||||| || || | Sbjct 2949 TCAACTATGTGGAGAAATTGCAGGACCCGACAAGAGAAGAGCTTGAAAGAGAGGCACAAA 3008 Query 598 TGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCA 657 |||| | |||||||||| |||| ||||| || ||||||||||| |||||||| |||| Sbjct 3009 TGGAAGGCGAAGTCTTTGGCCAGATTAAGAATGTAGAGAAGCTGCTGGCTCTGCTAAGCA 3068 Query 658 CTAGTTCGAGTGCCGACGCTAGGGACAATGAGGAGATCAC------TT------------ 699 | | ||| | ||| ||||| ||||||||||||||| |||| || Sbjct 3069 CGACTTCTACTGCGGACGCGAGGGACAATGAGGAGGTCACGGTACGTTGAGGCGCGATGG 3128 Query 700 ---------------------------------CGCTGTACCACAAGACAGTGTCGATAC 726 | ||||||||| || ||| |||||| Sbjct 3129 CGATCGAGTCAGCATGACGCTAACACGTGCAGACTCTGTACCACCAGGTGGTGGCGATAC 3188 Query 727 GGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTTT 786 |||| ||| |||| ||||| ||||| ||||| ||||||||||||||| || || Sbjct 3189 GGCCAAAGCTGATTGAGCTGATTGGAAAGTACTCGCAAAAGAAGGGTGAG--------TT 3240 Query 787 TACGCGAATTTGTGTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACGA 846 | | || | | | | | ||| | || | | |||| || || ||||| || || || Sbjct 3241 TGC-CGTAATAATTTCGAGCCCATCTAACGCGCTGCAGACGACTTTACGCAACTGAATGA 3299 Query 847 GAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAACC 906 |||||||| || ||||| || |||||||| | ||| | || ||||| ||||| ||| | Sbjct 3300 AAAGTTCATAAAAGCACGGCGAGACTACGAGGCTCTCTTGGAGGCCTCCATGTCTCAAGC 3359 Query 907 AGCGCAGCCCGGCTACGGTCGTCAACCCTATGGCTACGGCGCCGGCGCCCCGCCGCCTCA 966 | ||||| |||||||| || | || | ||||| |||| || |||| || | || Sbjct 3360 CGGCCAGCCTGGCTACGGCCGGCCGCCATTTGGCT---GCGCGGGACCCCCACCATCGCA 3416 Query 967 GAGTGCTCCGTAC 979 | | || |||||| Sbjct 3417 GGGAGCACCGTAC 3429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944597520060