Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016 -05-10] 83 sequences; 35,818,201 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3 199 1e-47 >seq3 Length=1861714 Score = 199 bits (220), Expect = 1e-47 Identities = 231/310 (75%), Gaps = 1/310 (0%) Strand=Plus/Minus Query 349 AGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCC 408 || |||| ||| || || | || || || || || || || || || || || ||||| Sbjct 602896 AGGAGCA-CAACCTGTTCCGTCGGGGACGACTGCGGCGACTGTGTCTCGTGTGCGCGCGT 602838 Query 409 TTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTG 468 | | ||||||| ||| ||||| ||| || || ||||| || || ||||| || | Sbjct 602837 TATTCGACTTCCAGCCATCGGAGGACGGGGAATTACAATTCCGGAAGGGGGACATCATCG 602778 Query 469 CGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCA 528 | ||||| |||||||| || ||||||||||||||||| || | | || |||||||||| Sbjct 602777 CCGTTCTAGAGTCTGTCTATAAGGACTGGTGGAAGGGATCGTTAAGGGGCCAGACCGGCA 602718 Query 529 TCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAG 588 ||||||| | ||||| || ||||||||| |||||| || || ||||| || ||| Sbjct 602717 TCTTCCCGTTGAACTACGTTGAGAAGCTGTCGGATCCGACTCCAGATGAGCTTCAGCGAG 602658 Query 589 AAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTC 648 | || ||||||||| |||| ||||||||||| || ||||| || ||||| ||||| | Sbjct 602657 AGGCGCAGATGGAGTCGGAGGTCTTTGCGGAAATTAAGAATGTCGAGAAACTGCTTACAT 602598 Query 649 TGCTGAGCAC 658 |||| ||||| Sbjct 602597 TGCTCAGCAC 602588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945585524385