Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20destructans_20[genbank_20GCA_5F001641265.1_202016
-05-10] 83 sequences; 35,818,201 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq3 199 1e-47
>seq3
Length=1861714
Score = 199 bits (220), Expect = 1e-47
Identities = 231/310 (75%), Gaps = 1/310 (0%)
Strand=Plus/Minus
Query 349 AGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCC 408
|| |||| ||| || || | || || || || || || || || || || || |||||
Sbjct 602896 AGGAGCA-CAACCTGTTCCGTCGGGGACGACTGCGGCGACTGTGTCTCGTGTGCGCGCGT 602838
Query 409 TTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTG 468
| | ||||||| ||| ||||| ||| || || ||||| || || ||||| || |
Sbjct 602837 TATTCGACTTCCAGCCATCGGAGGACGGGGAATTACAATTCCGGAAGGGGGACATCATCG 602778
Query 469 CGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCA 528
| ||||| |||||||| || ||||||||||||||||| || | | || ||||||||||
Sbjct 602777 CCGTTCTAGAGTCTGTCTATAAGGACTGGTGGAAGGGATCGTTAAGGGGCCAGACCGGCA 602718
Query 529 TCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAG 588
||||||| | ||||| || ||||||||| |||||| || || ||||| || |||
Sbjct 602717 TCTTCCCGTTGAACTACGTTGAGAAGCTGTCGGATCCGACTCCAGATGAGCTTCAGCGAG 602658
Query 589 AAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTC 648
| || ||||||||| |||| ||||||||||| || ||||| || ||||| ||||| |
Sbjct 602657 AGGCGCAGATGGAGTCGGAGGTCTTTGCGGAAATTAAGAATGTCGAGAAACTGCTTACAT 602598
Query 649 TGCTGAGCAC 658
|||| |||||
Sbjct 602597 TGCTCAGCAC 602588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945585524385
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |