Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._2004NY16_20[genbank_20GCA_5F001630575.1_20201 6-05-27] 3,119 sequences; 31,314,325 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1998 210 7e-51 >seq1998 Length=11508 Score = 210 bits (232), Expect = 7e-51 Identities = 232/308 (75%), Gaps = 1/308 (0%) Strand=Plus/Plus Query 349 AGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCC 408 ||||||| || | || | || || || || ||||| || || ||||| || ||||| Sbjct 10187 AGCAGCA-CAGCCCGTTCCTTCAGGGACGACTGCAGCGACTGTGTCCCGTGTGCGCGCAT 10245 Query 409 TTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTG 468 | | ||||||| ||| ||||| ||| || || |||||||| || ||||| || | Sbjct 10246 TGTTCGACTTCCAGCCATCGGAGGACGGGGAATTACAATTCCGCAAGGGGGACATAATCG 10305 Query 469 CGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCA 528 | ||||| |||||||| || ||||||||||||||||| || | | || |||||||||| Sbjct 10306 CCGTTCTGGAGTCTGTCTATAAGGACTGGTGGAAGGGATCGTTAAGGGGCCAGACCGGCA 10365 Query 529 TCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAG 588 | ||||| | ||||| |||||||||||| |||||| || || ||||| || ||| Sbjct 10366 TTTTCCCGTTGAACTACGTCGAGAAGCTGTCGGATCCAACTCCAGATGAGCTTCAGCGAG 10425 Query 589 AAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTC 648 | || ||||||||| |||| |||||||||||||| ||||| || ||||| ||||| | Sbjct 10426 AGGCGCAGATGGAGTCGGAGGTCTTTGCGGAGATTAAGAATGTCGAGAAACTGCTTACCT 10485 Query 649 TGCTGAGC 656 |||| ||| Sbjct 10486 TGCTCAGC 10493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945056030805