Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 103_20[genbank_20GCA_5F000750895.1_202014-09-09] 1,794 sequences; 30,255,792 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq523 219 1e-53 >seq523 Length=34228 Score = 219 bits (242), Expect = 1e-53 Identities = 234/308 (76%), Gaps = 1/308 (0%) Strand=Plus/Plus Query 349 AGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCC 408 ||||||| || || || | || || || || ||||| || || || || || ||||| Sbjct 10261 AGCAGCA-CAGCCTGTTCCTTCAGGGACGACTGCAGCGACTGTGTCTCGTGTGCGCGCGT 10319 Query 409 TTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTG 468 | | ||||||| ||| ||||| ||||| || ||||| || || ||||| || | Sbjct 10320 TATTCGACTTCCAGCCATCGGAGGATGGCGAATTACAATTCCGGAAGGGGGACATCATCG 10379 Query 469 CGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCA 528 | ||||| ||||||||||| |||||||||||||| || || ||| | || |||||||||| Sbjct 10380 CCGTTCTAGAGTCTGTGTATAAGGACTGGTGGAAAGGATCACTGAGGGGCCAGACCGGCA 10439 Query 529 TCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAG 588 ||||||| | ||||| |||||||||||| |||||| || || ||||| || ||| Sbjct 10440 TCTTCCCATTGAACTACGTCGAGAAGCTGTCGGATCCAACTCCAGATGAGCTTCAGCGAG 10499 Query 589 AAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTC 648 | || ||||||||| |||| |||||||||||||| ||||| || ||||| ||||| | Sbjct 10500 AGGCGCAGATGGAGTCGGAGGTCTTTGCGGAGATTAAGAATGTCGAGAAACTGCTCACAT 10559 Query 649 TGCTGAGC 656 |||| ||| Sbjct 10560 TGCTCAGC 10567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945287117430