Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq948 210 7e-51 >seq948 Length=5414 Score = 210 bits (232), Expect = 7e-51 Identities = 221/291 (76%), Gaps = 0/291 (0%) Strand=Plus/Minus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || || || || || || |||||||| |||||| | | ||||||| || || Sbjct 1085 TCAGGGACGACTGCGGCGACTGTATCCCGCGTGCGCGCCTTATTCGACTTCCAACCATCC 1026 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 || | || || ||| ||||| || || || || || || ||||| |||||||||||| Sbjct 1025 GAGGCGGGAGAATTGCAGTTCCGAAAGGGAGATATAATCGCCGTTCTGGAGTCTGTGTAC 966 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 || || ||||||||||| || || | || ||||||||||||||||| | ||||| || Sbjct 965 AAAGATTGGTGGAAGGGGTCGTTGAGGGGCCAGACCGGCATCTTCCCGTTGAACTACGTT 906 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||||||| |||||| || ||| ||||| || | || || |||||||| |||| Sbjct 905 GAGAAGCTGTCGGATCCGACTCCGGATGAGCTTCAGCGTGAGGCGCAGATGGAATCGGAG 846 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 |||||||||||||| ||||| |||||||| ||||| | |||| |||||| Sbjct 845 GTCTTTGCGGAGATTAAGAATGTGGAGAAACTGCTTACGTTGCTCAGCACT 795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945017661705