Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq3305 197 4e-47 >seq3305 Length=2846 Score = 197 bits (218), Expect = 4e-47 Identities = 225/302 (75%), Gaps = 0/302 (0%) Strand=Plus/Minus Query 357 CAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGAC 416 ||| || || | ||||| || || || || || || ||||| || ||||| | | |||| Sbjct 1071 CAACCTGTTCCGTCTGGTACGACTGCGGCGACGGTGTCCCGAGTGCGCGCTTTATTCGAC 1012 Query 417 TTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTC 476 ||| ||| ||||| || || || ||||| || || ||||| || || ||||| Sbjct 1011 TTCCAGCCATCGGAGGATGGTGAATTACAATTCCGGAAGGGGGACATAATCGCTGTTCTA 952 Query 477 GAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCC 536 ||||| | || ||||||||||||||||| || || | || ||||||||||||||||| Sbjct 951 GAGTCGGCCTATAAGGACTGGTGGAAGGGATCACTCAGGGGCCAGACCGGCATCTTCCCG 892 Query 537 CTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAG 596 | ||||| || ||||||||| |||||| || || ||||| || |||| || ||| Sbjct 891 TTGAACTACGTTGAGAAGCTGTCGGATCCGACTCCAGATGAGCTTCAGCGAGAGGCGCAG 832 Query 597 ATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 ||||| |||| ||||||||||| |||||||| || ||||| |||| || |||| ||| Sbjct 831 ATGGAATCGGAGGTCTTTGCGGAAATCAAGAATGTCGAGAAATTGCTTACTTTGCTCAGC 772 Query 657 AC 658 || Sbjct 771 AC 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944400093600