Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3808_20[genbank_20GCA_5F000750675.1_202014-09-09] 3,534 sequences; 27,778,879 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq2339 205 3e-49 >seq2339 Length=12353 Score = 205 bits (226), Expect = 3e-49 Identities = 220/291 (76%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 369 TCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGACTTCACGCCCTCG 428 || || || || ||||| || || |||||||| |||||| | | ||||||| || || Sbjct 9398 TCGGGGACGACTGCAGCGACTGTATCCCGCGTGCGCGCCTTATTCGACTTCCAACCATCC 9457 Query 429 GAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTCGAGTCTGTGTAC 488 ||| | || || || ||||| || || || || || || ||||| ||||| ||||| Sbjct 9458 GAAGCGGGAGAATTACAATTCCGAAAGGGAGATATAATCGCCGTTCTGGAGTCCGTGTAT 9517 Query 489 AAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCCCTCAACTATGTC 548 || || ||||||||||| || || | || ||||||||||||||||| | ||||| || Sbjct 9518 AAAGATTGGTGGAAGGGGTCGTTGAGGGGCCAGACCGGCATCTTCCCATTGAACTACGTG 9577 Query 549 GAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAGATGGAGGCGGAA 608 ||||||||| |||||| || ||| ||||| || | || || ||||||||| |||| Sbjct 9578 GAGAAGCTGTCGGATCCGACTCCGGACGAGCTTCAGCGGGAGGCGCAGATGGAGTCGGAG 9637 Query 609 GTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGCACT 659 |||||||||||||| ||||| || ||||| ||||| | |||| |||||| Sbjct 9638 GTCTTTGCGGAGATTAAGAATGTCGAGAAACTGCTTACGTTGCTCAGCACT 9688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944983652730