Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 4246_20[genbank_20GCA_5F000750735.1_202014-09-09] 3,685 sequences; 25,759,859 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq1125 208 2e-50 >seq1125 Length=12664 Score = 208 bits (230), Expect = 2e-50 Identities = 424/634 (67%), Gaps = 62/634 (10%) Strand=Plus/Plus Query 357 CAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTTTACGAC 416 ||| || || | || || || || ||||| || || ||||| || || || || | |||| Sbjct 9852 CAACCTGTTCCGTCAGGTACGACTGCAGCGACTGTGTCCCGAGTGCGTGCACTATTCGAC 9911 Query 417 TTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCGGTTCTC 476 ||| ||| ||||| || || || ||||| || || || || || || |||||| Sbjct 9912 TTCCAGCCATCGGAGGATGGTGAATTACAATTCCGAAAGGGGGATATCATCGCCGTTCTC 9971 Query 477 GAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATCTTCCCC 536 ||||| | || ||||||||||||||||| || | | || ||||||||||||||||| Sbjct 9972 GAGTCCGCCTATAAGGACTGGTGGAAGGGATCGTTAAGGGGCCAGACCGGCATCTTCCCA 10031 Query 537 CTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAAGCTCAG 596 | ||||| || ||||||||| ||||| || | ||| ||||| || |||| || ||| Sbjct 10032 TTGAACTACGTTGAGAAGCTGTCAGATCCGACTACGGATGAGCTTCAGCGAGAGGCACAG 10091 Query 597 ATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTGCTGAGC 656 |||||| |||| || ||||||||||| ||||| || ||||| ||||| ||||||| ||| Sbjct 10092 ATGGAGTCGGAGGTTTTTGCGGAGATTAAGAATGTTGAGAAACTGCTTACTCTGCTCAGC 10151 Query 657 A---CTAGTTC-GAGTGCCGACGCTAGGGACAATGAGGAGATCACT--------TCGCTG 704 | | | ||| |||| || | | ||| ||||| || || ||| || || Sbjct 10152 ACGTCGACTTCTGAGTTACGTGGAGA-GGATAATGATGAAATAACTGTATGTGCCCGGTG 10210 Query 705 -------TACCA----------------CAAGACAGTGT---------------CGATAC 726 ||||| | ||| | | | |||||| Sbjct 10211 GAAGCGTTACCATACTCTGCTAATCGTTCCAGAAACTATACCATTCAACTCTAGCGATAC 10270 Query 727 GGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCGCAAAAGAAGGGTAAGTGGAATCTTT 786 | || ||| | |||||||| ||||| ||||| || || |||||||||| || ||| Sbjct 10271 GTCCTAAGCTCATCGAGCTTATTGGAAAGTACTCTCAGAAGAAGGGTAGGTTTTGTCTGC 10330 Query 787 TACGCGAATTTGT-GTGTTGGCCACTGATCGTGTTCCAGATGATTTCACGCAGCTCAACG 845 || || || | || || ||| | ||||||| ||||| || || |||| Sbjct 10331 CACTGCCCTTGGTACCGATG----CTAATCTCTTAACAGATGACTTCACCCAACTAAACG 10386 Query 846 AGAAGTTCATCAAGGCACGCCGCGACTACGAAACCCTCCTTGAAGCCTCGATGTCGCAAC 905 ||||||| ||||| || ||| | |||||||| | ||| || || | |||||||| || | Sbjct 10387 AGAAGTTTATCAAAGCTCGCAGAGACTACGAGAGCCTACTGGAGACGTCGATGTCCCATC 10446 Query 906 CAGCGCAGCC------CGGCTACGGTCGTCAACC 933 || | ||||| ||| |||||||| | ||| Sbjct 10447 CACCCCAGCCAACCTACGGATACGGTCGACCACC 10480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15944957317575