Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20WSF_203629_20[genbank_20GCA_5F001662585.1_2
02016-06-24] 409 sequences; 35,517,105 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq48 214 6e-52
>seq48
Length=212193
Score = 214 bits (236), Expect = 6e-52
Identities = 233/308 (76%), Gaps = 1/308 (0%)
Strand=Plus/Minus
Query 349 AGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCC 408
||||||| ||| | || |||| || || || ||||| || || || || || |||||
Sbjct 28173 AGCAGCA-CAACCCGTTCCATCGGGGACTACTGCAGCGACTGTGTCTCGTGTGCGCGCGT 28115
Query 409 TTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTG 468
| | ||||||| ||| ||||| ||| || || |||||||| || ||||| || |
Sbjct 28114 TATTCGACTTCCAGCCATCGGAGGACGGGGAATTACAATTCCGCAAGGGGGACATAATCG 28055
Query 469 CGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCA 528
| ||||| |||||||| || ||||||||||||||||| || || | || |||||||| |
Sbjct 28054 CCGTTCTAGAGTCTGTCTATAAGGACTGGTGGAAGGGATCGTTGAGGGGCCAGACCGGAA 27995
Query 529 TCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAG 588
||||||| | ||||| || |||||||| |||||| || ||| ||||| || |||
Sbjct 27994 TCTTCCCGTTGAACTACGTTGAGAAGCTTTCGGATCCGACTCCGGATGAGCTTCAGCGAG 27935
Query 589 AAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTC 648
| || ||||||||| |||| |||||||||||||| ||||| || ||||| ||||| |
Sbjct 27934 AGGCGCAGATGGAGTCGGAGGTCTTTGCGGAGATTAAGAATGTCGAGAAACTGCTTACGT 27875
Query 649 TGCTGAGC 656
|||| |||
Sbjct 27874 TGCTCAGC 27867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945528668355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |