Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pyrenochaeta_20sp._20DS3sAY3a_20[genbank_20GCA_5F001644535.1_202016-
05-18] 69 sequences; 38,501,010 total letters
Query= NC_013699.1
Length=5018
Score E
Sequences producing significant alignments: (Bits) Value
seq6 405 2e-109
>seq6
Length=1708680
Score = 405 bits (448), Expect = 2e-109
Identities = 650/926 (70%), Gaps = 42/926 (5%)
Strand=Plus/Minus
Query 3 CAGATCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAAC 62
||| ||||||| |||||| | ||||| |||| |||||||| || |||||| | || ||
Sbjct 893916 CAGGTCAAGGCCAAGATCTTGGAGCGCATGGCAGAATGGACAGAAATGTTCTCAAGAGAC 893857
Query 63 CCTGATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGAT 122
|||||||| || || ||| | || || |||| ||| ||| | || |||| ||| |
Sbjct 893856 CCTGATCTGGGTATTATGTCGGGTGCATACATGAAGCTGAAGTCGCAGAGTGAGTGACGT 893797
Query 123 CAACTCTGGTTCGTTGGGAG---CA---CTGACCAACGTGTTGTAGACCCTAACCTGCGA 176
|||| || || || || ||||| ||| ||||| || ||||| ||
Sbjct 893796 AAACTT------GTAGGAAGTTCCAAATCTGAC-----TGTCGTAGATCCCAACCTTCGC 893748
Query 177 CCTCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAG 236
| || ||||| || || ||||| ||||| | ||| | ||||||||||| || ||||||
Sbjct 893747 GCACCATCGAAGCCCCAAAAGACACAGATATCCGACACTGACCGCCAGAAAGAGGAGGAG 893688
Query 237 GAGCTACAGATGGCGCTGGCACTCTCCGTCAAGGAA---AGCGGGACCGAGCCATCCGCC 293
|||||||| ||||| | ||| | || | | || | ||| | | ||| | ||
Sbjct 893687 GAGCTACAAATGGCATTAGCAATGTCGATAAGAGAGTCTAAAGGGGCGGCTCCAACTGCT 893628
Query 294 GCCAGGTCCAACCAGCCGCAAGCAAAAGCCCCACAACAATCCGCCCCGGAACAAGAGCAG 353
|| | |||| || || | |||| ||| || || | ||| | |||
Sbjct 893627 GCAAAAGCCAATACTCCCCAGG---AAGCTGGCCAAAGTTCTGCAGCTCAACCCGCACAG 893571
Query 354 CAT---CAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCCCTT 410
| | ||| | || |||| || || || || || || || || || || || ||| |
Sbjct 893570 CCTTTGCAACCAATGCCATCGGGCACAACTGCTGCGACTGTTTCTCGTGTGCGAGCCTTG 893511
Query 411 TACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATTGCG 470
| ||||||| || || || |||||||| || ||||||||||| |||||||||||
Sbjct 893510 TTCGACTTCCAACCTTCTGAGCCCGGCGAACTGCAATTCCGCAAAGGTGACATTATTGCT 893451
Query 471 GTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGCATC 530
|||||||| || || ||||||||||||||||| || || |||||||||||||| ||||||
Sbjct 893450 GTTCTCGAATCAGTATACAAGGACTGGTGGAAAGGATCGCTGCGTGGACAGACAGGCATC 893391
Query 531 TTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGAGAA 590
||||| |||||||||||||||||||||||||| || || ||| ||| | |||| |||
Sbjct 893390 TTCCCTCTCAACTATGTCGAGAAGCTGCAGGACCCGACTCGGGAAGAGTTGGAGAAGGAA 893331
Query 591 GCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCTCTG 650
|| || |||||||| || || || ||| | |||| ||||||||| |||||||| || |||
Sbjct 893330 GCACATATGGAGGCCGAGGTTTTCGCGCAAATCAGGAACGTGGAAAAGCTGCTTGCACTG 893271
Query 651 CTGAGCACTAGTTC---------GAGTGCCGACGCTAGGGACAATGAGGAGATCACTTCG 701
|| ||||| || || ||| || | | | || || ||||||||||| |
Sbjct 893270 CTCAGCACCAGCTCACAGCCAGGTGGTGGTGATGTTCGTGATAACGAGGAGATCACAGAG 893211
Query 702 CTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTATTCG 761
|| |||||| ||| | | || |||| ||| | ||||| || ||||| ||||| |||
Sbjct 893210 CTATACCACTCAACACTAGCTATCAGGCCCAAGCTCATCGAACTTATTGGGAAGTACTCG 893151
Query 762 CAAAAGAAGGGTAAGTGGAATCTTTTACGCGAATTTGTGTGT-TGGCCACTGATCGTGTT 820
|| ||||| |||| || || | | | || | || | || | | | | |||||
Sbjct 893150 CAGAAGAAAGGTATGT-ATGTCCATGA-TCACATCTCAGTATATGACTAAT--TTGTGTT 893095
Query 821 CCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGAAACC 880
|||||| ||||||||| | |||||||| ||||||||||| || || ||||||||| |
Sbjct 893094 --AGATGACTTCACGCAGTTGAACGAGAAATTCATCAAGGCTCGTCGGGACTACGAATCA 893037
Query 881 CTCCTTGAAGCCTCGATGTCGCAACC 906
| || ||||| || ||||| || ||
Sbjct 893036 ATGCTCGAAGCTTCAATGTCCCAGCC 893011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15945587966055
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |