Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pyrenochaeta_20sp._20UM_20256_20[genbank_20GCA_5F000359685.1_202013- 04-10] 254 sequences; 35,484,281 total letters Query= NC_013699.1 Length=5018 Score E Sequences producing significant alignments: (Bits) Value seq21 381 2e-102 >seq21 Length=517113 Score = 381 bits (422), Expect = 2e-102 Identities = 650/930 (70%), Gaps = 53/930 (6%) Strand=Plus/Minus Query 7 TCAAGGCAAAGATCCTCGAGCGTATGGGTGAATGGACGGAGATGTTCGCCAGTAACCCTG 66 |||||||||||||||| || ||||||| || ||||| ||||||||| | || | || | Sbjct 339610 TCAAGGCAAAGATCCTTGAACGTATGGCGGAGTGGACAGAGATGTTCTCTAGCGATCCAG 339551 Query 67 ATCTTGGCATCATGGAGCAGGCCTATATGAGGCTTAAGACACAAAGTGCGTGTGATCAAC 126 | ||||| |||||| | || || |||| ||| ||||||||||||| || | Sbjct 339550 ACCTTGGGATCATGTCGGGCGCTTACATGAAGCTCAAGACACAAAGTGAGTATA------ 339497 Query 127 TCTGGTTCGTTGGGAGCA-CTGACCAACG-TGT----TGTA--GACCCTAACCTGCGACC 178 | || ||| | || || | ||||| || |||| ||||| || || ||| | Sbjct 339496 TATG---CGTAAAGGACAGCTCATCAACGCTGACAAGTGTACAGACCCAAATCTACGAGC 339440 Query 179 TCCGTCGAAACCTCAGAAGACCCAGATCACGGACTCGGACCGCCAGAAGGAAGAGGAGGA 238 || || || || ||||||||||||||| | || ||||||||||| || || || || || Sbjct 339439 ACCCTCAAAGCCACAGAAGACCCAGATCTCTGATTCGGACCGCCAAAAAGAGGAAGAAGA 339380 Query 239 GCTACAGATGGCGCTGGCACTCTCCGTCAAGGA---AAGCGGGACCGAGCCATCCGCCGC 295 | |||||||| || ||| | || ||| ||| || || | | || | || || Sbjct 339379 ATTGCAGATGGCACTTGCAATGTCGATCAGGGAGTCAAAGGGTGCAGCCCCGACTGCTGC 339320 Query 296 CAGGTCCAACCAGCCGCAAGCAAAAGCC----CCAC----AACAATCCGCCCCGGAACAA 347 | ||||||| || |||| |||| ||| || |||| || | ||| Sbjct 339319 AAAGTCCAACACACCACAAG---AAGCTGGATCCAGCTCAAATAATCAACCT--GCCCAA 339265 Query 348 GAGCAGCATCAAGCTATTGCATCTGGAACCACAGCAGCTACCGTCTCCCGCGTTCGCGCC 407 |||| |||| | | | | || || || ||||| || || || || || || ||| Sbjct 339264 T--CAGC-TCAACCAGTCCCGGCGGGCACGACTGCAGCAACGGTTTCACGTGTACGAGCC 339208 Query 408 CTTTACGACTTCACGCCCTCGGAACCCGGCGAGTTGGCTTTCCGCAAAGGCGACATTATT 467 || | ||| ||| ||||| || || ||||| || ||||| || || || || || Sbjct 339207 CTGTTCGATTTCCAACCCTCTGAGCCTGGCGAACTGCAGTTCCGTAAGGGTGATATCATA 339148 Query 468 GCGGTTCTCGAGTCTGTGTACAAGGACTGGTGGAAGGGTTCTCTGCGTGGACAGACCGGC 527 ||||| || ||||| ||||| ||||| |||||||| || ||||| || |||||||| || Sbjct 339147 GCGGTGCTGGAGTCGGTGTATAAGGATTGGTGGAAAGGATCTCTTCGCGGACAGACGGGT 339088 Query 528 ATCTTCCCCCTCAACTATGTCGAGAAGCTGCAGGATCCTACCAAGGAGGAGCTCGAGAGA 587 || ||||| ||||||||||| ||||||||||| || || || |||||||| || | | Sbjct 339087 ATTTTCCCGCTCAACTATGTGGAGAAGCTGCAAGACCCAACACGCGAGGAGCTGGAAAAA 339028 Query 588 GAAGCTCAGATGGAGGCGGAAGTCTTTGCGGAGATCAAGAACGTGGAGAAGCTGCTAGCT 647 ||||| || |||||||| ||||| ||||| | || || |||||||||||||| || Sbjct 339027 GAAGCGCAAATGGAGGCCGAAGTGTTTGCTCAAATACGCAATGTGGAGAAGCTGCTCGCC 338968 Query 648 CTGCTGAGCACTAGTTC---------GAGTGCCGACGCTAGGGACAATGAGGAGATCACT 698 | |||||||| || || | | ||| | | |||| || |||||||| || Sbjct 338967 TTACTGAGCACGAGCTCACAAGCAGGCGGCGGCGATGTTCGGGATAACGAGGAGATTACA 338908 Query 699 TCGCTGTACCACAAGACAGTGTCGATACGGCCGAAGTTGATCGAGCTCATTGGCAAGTAT 758 ||| |||||| ||| | | || || |||||| ||||||||||||||||||||||| Sbjct 338907 GAGCTATACCACTCAACACTAGCTATCCGACCGAAGCTGATCGAGCTCATTGGCAAGTAT 338848 Query 759 TCGCAAAAGAAGGGTAAGTGGAATCTTTTACG-CGAATTTG-TGTGTTGGCCACTGATCG 816 ||||| |||||||||||| | | ||||| || ||| | || || || | Sbjct 338847 TCGCAGAAGAAGGGTAAG-----TTTGTTACGTAGACCTTGCGGAGTACAAAGCTAAT-G 338794 Query 817 TGTTCCAGATGATTTCACGCAGCTCAACGAGAAGTTCATCAAGGCACGCCGCGACTACGA 876 | | | |||||| || ||||| | ||||||||||| || ||||| || || |||||||| Sbjct 338793 TTTGCAAGATGACTTTACGCAATTGAACGAGAAGTTTATAAAGGCTCGTCGGGACTACGA 338734 Query 877 AACCCTCCTTGAAGCCTCGATGTCGCAACC 906 || | ||||| ||||| ||||| ||||| Sbjct 338733 GTCCATGCTTGAGGCCTCAATGTCTCAACC 338704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15945555701130